RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 CREB5Q02930 508 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 SLC26A11Q86WA9 606 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 C8orf37Q96NL8 207 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 XAB2Q9HCS7 855 aaKnown RBP13.35□□□□□ -0.27
TOP2B-203ENST00000424225 RLFQ13129 1914 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 ENDOD1O94919 500 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 EPHA3P29320 983 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 EIF3EP60228 445 aaKnown RBP13.35□□□□□ -0.27
TOP2B-203ENST00000424225 MED21Q13503 144 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 PDE1CQ14123 709 aaPredicted RBP13.35□□□□□ -0.27
TOP2B-203ENST00000424225 C15orf59Q2T9L4 293 aaPredicted RBP13.35□□□□□ -0.27
TOP2B-203ENST00000424225 MMEL1Q495T6 779 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.35□□□□□ -0.278e-6■□□□□ 9.8
TOP2B-203ENST00000424225 KLHL35Q6PF15 583 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 AMIGO2Q86SJ2 522 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 C10orf107Q8IVU9 208 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 PLD6Q8N2A8 252 aaKnown RBP13.35□□□□□ -0.27
TOP2B-203ENST00000424225 MARVELD2Q8N4S9 558 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 RNF148Q8N7C7 305 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 PLD5Q8N7P1 536 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 FAM156AQ8NDB6 213 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 SPATA18Q8TC71 538 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 ALKBH8Q96BT7 664 aaKnown RBP13.35□□□□□ -0.27
TOP2B-203ENST00000424225 OR52B2Q96RD2 323 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 RNPEPQ9H4A4 650 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 GPATCH2LQ9NWQ4 482 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 BLOC1S6Q9UL45 172 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 ARHGAP42A6NI28 874 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 YDJCA8MPS7 323 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 EXTL3O43909 919 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 ZC3H11AO75152 810 aaKnown RBP eCLIP13.35□□□□□ -0.27
TOP2B-203ENST00000424225 FKBP6O75344 327 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 IMPDH2P12268 514 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 CYP3A5P20815 502 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 CDH8P55286 799 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 FASTKD1Q53R41 847 aaKnown RBP13.35□□□□□ -0.27
TOP2B-203ENST00000424225 IYDQ6PHW0 289 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 SCARA5Q6ZMJ2 495 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 NUDCD3Q8IVD9 361 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 NDUFAF2Q8N183 169 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 TTC13Q8NBP0 860 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 CMASQ8NFW8 434 aaPredicted RBP13.35□□□□□ -0.27
TOP2B-203ENST00000424225 UPF1Q92900 1129 aaKnown RBP eCLIP13.35□□□□□ -0.27
TOP2B-203ENST00000424225 FAM210AQ96ND0 272 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 TARS2Q9BW92 718 aaKnown RBP13.35□□□□□ -0.27
TOP2B-203ENST00000424225 GMPR2Q9P2T1 348 aaKnown RBP13.35□□□□□ -0.27
TOP2B-203ENST00000424225 TMCO1Q9UM00 188 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 DENRO43583 198 aaKnown RBP13.34□□□□□ -0.27
TOP2B-203ENST00000424225 GABBR2O75899 941 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 TFPTP0C1Z6 253 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 XRCC1P18887 633 aaPredicted RBP13.34□□□□□ -0.27
TOP2B-203ENST00000424225 ASPAP45381 313 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 MTTPP55157 894 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 YBX1P67809 324 aaKnown RBP13.34□□□□□ -0.27
TOP2B-203ENST00000424225 TTC39BQ5VTQ0 682 aaPredicted RBP13.34□□□□□ -0.27
TOP2B-203ENST00000424225 C1orf228Q6PIY5 440 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 KBTBD7Q8WVZ9 684 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 DGCR14Q96DF8 476 aaKnown RBP13.34□□□□□ -0.27
TOP2B-203ENST00000424225 PGBD4Q96DM1 585 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 TUBB6Q9BUF5 446 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 ZC3H12CQ9C0D7 883 aaKnown RBP13.34□□□□□ -0.27
TOP2B-203ENST00000424225 CYP26B1Q9NR63 512 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 FBXO40Q9UH90 709 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 CLRN2A0PK11 232 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 TCP10L2B9ZVM9 353 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 COL6A2P12110 1019 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 RBL1P28749 1068 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 ALDH1A3P47895 512 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 DMP1Q13316 513 aaPredicted RBP13.34□□□□□ -0.27
TOP2B-203ENST00000424225 R3HDM1Q15032 1099 aaKnown RBP13.34□□□□□ -0.27
TOP2B-203ENST00000424225 LIN9Q5TKA1 542 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 ZNF410Q86VK4 478 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 XYLT1Q86Y38 959 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 SNRNP27Q8WVK2 155 aaKnown RBP13.34□□□□□ -0.27
TOP2B-203ENST00000424225 CENPKQ9BS16 269 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 MTMR12Q9C0I1 747 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 XYLT2Q9H1B5 865 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 CHCHD3Q9NX63 227 aaKnown RBP13.34□□□□□ -0.27
TOP2B-203ENST00000424225 GABBR1Q9UBS5 961 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 CAPNS1P04632 268 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 RPS6P62753 249 aaKnown RBP13.34□□□□□ -0.27
TOP2B-203ENST00000424225 HIC1Q14526 733 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 SEPT7Q16181 437 aaKnown RBP13.34□□□□□ -0.27
TOP2B-203ENST00000424225 Q3C1V9 767 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 ENOSF1Q7L5Y1 443 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 LCA5Q86VQ0 697 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 CTAGE3PQ8IX95 158 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 RBM12BQ8IXT5 1001 aaKnown RBP13.34□□□□□ -0.27
TOP2B-203ENST00000424225 TMEM192Q8IY95 271 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 TRIM11Q96F44 468 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 PKP2Q99959 881 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 SLX1AQ9BQ83 275 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 CISHQ9NSE2 258 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 SCINQ9Y6U3 715 aa13.34□□□□□ -0.27
TOP2B-203ENST00000424225 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.33□□□□□ -0.28
TOP2B-203ENST00000424225 IQANK1A0A1B0GTG1 560 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 DCXO43602 365 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 INHBAP08476 426 aa13.33□□□□□ -0.28
TOP2B-203ENST00000424225 CDH2P19022 906 aaPredicted RBP13.33□□□□□ -0.28
TOP2B-203ENST00000424225 PHBP35232 272 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms