RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 BBOF1Q8ND07 529 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 CCDC110Q8TBZ0 833 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 ASB10Q8WXI3 467 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 PDLIM2Q96JY6 352 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 C16orf45Q96MC5 204 aaPredicted RBP3.08□□□□□ -1.92
PMS1-209ENST00000424059 TARS2Q9BW92 718 aaKnown RBP3.08□□□□□ -1.92
PMS1-209ENST00000424059 TRIM4Q9C037 500 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 KIF9Q9HAQ2 790 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 BCO1Q9HAY6 547 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 TRPV4Q9HBA0 871 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 EMC7Q9NPA0 242 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 HPS4Q9NQG7 708 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 ABCF3Q9NUQ8 709 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 HPF1Q9NWY4 346 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 OBP2AQ9NY56 170 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 HESX1Q9UBX0 185 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 TLK1Q9UKI8 766 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 NOX1Q9Y5S8 564 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 SPATA31A6Q5VVP1 1343 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 HMCN1Q96RW7 5635 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 EEA1Q15075 1411 aa3.08□□□□□ -1.92
PMS1-209ENST00000424059 AP3B1O00203 1094 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 CACNB4O00305 520 aaPredicted RBP3.07□□□□□ -1.92
PMS1-209ENST00000424059 ZW10O43264 779 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 ATP8B1O43520 1251 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 AHCYL1O43865 530 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 DAB1O75553 588 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 SLITRK3O94933 977 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 NPPAP01160 153 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 MCM3P25205 808 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 DNAJB1P25685 340 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 ANXA13P27216 316 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 EVI2BP34910 448 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 SOX6P35712 828 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 CHKAP35790 457 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 MPLP40238 635 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 PHKA1P46020 1223 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 PTTG1IPP53801 180 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 ZNF280AP59817 542 aaPredicted RBP3.07□□□□□ -1.92
PMS1-209ENST00000424059 KRTAP10-11P60412 298 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 DSTNP60981 165 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 PIN1Q13526 163 aaPredicted RBP3.07□□□□□ -1.92
PMS1-209ENST00000424059 TRIM25Q14258 630 aaKnown RBP3.07□□□□□ -1.92
PMS1-209ENST00000424059 BECN1Q14457 450 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 DHCR24Q15392 516 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 PITRM1Q5JRX3 1037 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 MFSD14BQ5SR56 506 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 PRAMEF14Q5SWL7 426 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 ANKS6Q68DC2 871 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 ABHD15Q6UXT9 468 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 B4GALNT4Q76KP1 1039 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 LPCAT2Q7L5N7 544 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 EPHX4Q8IUS5 362 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 CCAR2Q8N163 923 aaKnown RBP3.07□□□□□ -1.92
PMS1-209ENST00000424059 BOLLQ8N9W6 283 aaKnown RBP3.07□□□□□ -1.92
PMS1-209ENST00000424059 NAXEQ8NCW5 288 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 OR7D4Q8NG98 312 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 CTCFLQ8NI51 663 aaPredicted RBP3.07□□□□□ -1.92
PMS1-209ENST00000424059 KIF18AQ8NI77 898 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 CUL5Q93034 780 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 GJA10Q969M2 543 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 SAAL1Q96ER3 474 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 DTNBP1Q96EV8 351 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 FUBP3Q96I24 572 aaKnown RBP eCLIP3.07□□□□□ -1.92
PMS1-209ENST00000424059 RBM41Q96IZ5 413 aaKnown RBP3.07□□□□□ -1.92
PMS1-209ENST00000424059 VPS50Q96JG6 964 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 SNX27Q96L92 541 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 BARD1Q99728 777 aaKnown RBP3.07□□□□□ -1.92
PMS1-209ENST00000424059 TUBA1CQ9BQE3 449 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 GPATCH1Q9BRR8 931 aaKnown RBP3.07□□□□□ -1.92
PMS1-209ENST00000424059 ANO3Q9BYT9 981 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 RHOBTB2Q9BYZ6 727 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 EDEM3Q9BZQ6 932 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 RNPEPQ9H4A4 650 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 PRDM13Q9H4Q3 707 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 RNF181Q9P0P0 153 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 MTRRQ9UBK8 725 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 SH3BGRL2Q9UJC5 107 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 HPCAL4Q9UM19 191 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 MAPRE3Q9UPY8 281 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 USP15Q9Y4E8 981 aaPredicted RBP3.07□□□□□ -1.92
PMS1-209ENST00000424059 ZMYM3Q14202 1370 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 hCG_1642624A0A1W2PR95 340 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 TARSL2A2RTX5 802 aaKnown RBP3.07□□□□□ -1.92
PMS1-209ENST00000424059 DRGXA6NNA5 263 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 CCDC169A6NNP5 214 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 VSTM5A8MXK1 200 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 CXorf49A8MYA2 514 aaPredicted RBP3.07□□□□□ -1.92
PMS1-209ENST00000424059 ALG1L2C9J202 215 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 TMEM232C9JQI7 657 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 CETN3O15182 167 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 ZNF185O15231 689 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 HDAC3O15379 428 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 YKT6O15498 198 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 STRNO43815 780 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 DDHD2O94830 711 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 LARGE1O95461 756 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 SERPINC1P01008 464 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 DNTTP04053 509 aa3.07□□□□□ -1.92
PMS1-209ENST00000424059 FESP07332 822 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms