RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 AP5Z1O43299 807 aa19.4■□□□□ 0.7
SREBF1-206ENST00000423161 KLKB1P03952 638 aa19.4■□□□□ 0.7
SREBF1-206ENST00000423161 HMBSP08397 361 aa19.4■□□□□ 0.7
SREBF1-206ENST00000423161 CISD3P0C7P0 127 aa19.4■□□□□ 0.7
SREBF1-206ENST00000423161 SLC8A3P57103 927 aa19.4■□□□□ 0.7
SREBF1-206ENST00000423161 COG7P83436 770 aa19.4■□□□□ 0.7
SREBF1-206ENST00000423161 RPL6Q02878 288 aaKnown RBP19.4■□□□□ 0.7
SREBF1-206ENST00000423161 COBLL1Q53SF7 1204 aa19.4■□□□□ 0.7
SREBF1-206ENST00000423161 PIGZQ86VD9 579 aa19.4■□□□□ 0.7
SREBF1-206ENST00000423161 ARHGAP18Q8N392 663 aa19.4■□□□□ 0.7
SREBF1-206ENST00000423161 IPO4Q8TEX9 1081 aaKnown RBP19.4■□□□□ 0.7
SREBF1-206ENST00000423161 ERLEC1Q96DZ1 483 aa19.4■□□□□ 0.7
SREBF1-206ENST00000423161 GSDMAQ96QA5 445 aa19.4■□□□□ 0.7
SREBF1-206ENST00000423161 NUSAP1Q9BXS6 441 aaKnown RBP19.4■□□□□ 0.7
SREBF1-206ENST00000423161 UBXN6Q9BZV1 441 aa19.4■□□□□ 0.7
SREBF1-206ENST00000423161 DCLK3Q9C098 648 aa19.4■□□□□ 0.7
SREBF1-206ENST00000423161 TMEM74BQ9NUR3 256 aa19.4■□□□□ 0.7
SREBF1-206ENST00000423161 GOLGA6L4A6NEF3 574 aa19.39■□□□□ 0.69
SREBF1-206ENST00000423161 NDUFV2P19404 249 aa19.39■□□□□ 0.69
SREBF1-206ENST00000423161 CORO1AP31146 461 aaKnown RBP19.39■□□□□ 0.69
SREBF1-206ENST00000423161 CHKAP35790 457 aa19.39■□□□□ 0.69
SREBF1-206ENST00000423161 DPP6P42658 865 aa19.39■□□□□ 0.69
SREBF1-206ENST00000423161 YWHAGP61981 247 aaKnown RBP eCLIP19.39■□□□□ 0.69
SREBF1-206ENST00000423161 FKBP3Q00688 224 aaKnown RBP19.39■□□□□ 0.69
SREBF1-206ENST00000423161 LMAN2Q12907 356 aa19.39■□□□□ 0.69
SREBF1-206ENST00000423161 GOLGA7BQ2TAP0 167 aa19.39■□□□□ 0.69
SREBF1-206ENST00000423161 RAB41Q5JT25 222 aa19.39■□□□□ 0.69
SREBF1-206ENST00000423161 KIAA1211LQ6NV74 962 aa19.39■□□□□ 0.69
SREBF1-206ENST00000423161 SLC36A4Q6YBV0 504 aa19.39■□□□□ 0.69
SREBF1-206ENST00000423161 RSRC2Q7L4I2 434 aaKnown RBP19.39■□□□□ 0.69
SREBF1-206ENST00000423161 ZC3H3Q8IXZ2 948 aaKnown RBP19.39■□□□□ 0.69
SREBF1-206ENST00000423161 ANKRD52Q8NB46 1076 aa19.39■□□□□ 0.69
SREBF1-206ENST00000423161 P2RY11Q96G91 374 aa19.39■□□□□ 0.69
SREBF1-206ENST00000423161 GABRG3Q99928 467 aa19.39■□□□□ 0.69
SREBF1-206ENST00000423161 CD248Q9HCU0 757 aa19.39■□□□□ 0.69
SREBF1-206ENST00000423161 CACNA2D2Q9NY47 1150 aa19.39■□□□□ 0.69
SREBF1-206ENST00000423161 MARCH2Q9P0N8 246 aa19.39■□□□□ 0.69
SREBF1-206ENST00000423161 FBXO10Q9UK96 956 aa19.39■□□□□ 0.69
SREBF1-206ENST00000423161 STRIP2Q9ULQ0 834 aa19.39■□□□□ 0.69
SREBF1-206ENST00000423161 COQ4Q9Y3A0 265 aa19.39■□□□□ 0.69
SREBF1-206ENST00000423161 CKAP5Q14008 2032 aa19.39■□□□□ 0.69
SREBF1-206ENST00000423161 GIPC1O14908 333 aa19.38■□□□□ 0.69
SREBF1-206ENST00000423161 SMC2O95347 1197 aa19.38■□□□□ 0.69
SREBF1-206ENST00000423161 PENKP01210 267 aaPredicted RBP19.38■□□□□ 0.69
SREBF1-206ENST00000423161 ITPKAP23677 461 aa19.38■□□□□ 0.69
SREBF1-206ENST00000423161 TKTL1P51854 596 aa19.38■□□□□ 0.69
SREBF1-206ENST00000423161 PMS1P54277 932 aaKnown RBP19.38■□□□□ 0.69
SREBF1-206ENST00000423161 CUL2Q13617 745 aa19.38■□□□□ 0.69
SREBF1-206ENST00000423161 UAP1L1Q3KQV9 507 aa19.38■□□□□ 0.69
SREBF1-206ENST00000423161 SH3PXD2AQ5TCZ1 1133 aa19.38■□□□□ 0.69
SREBF1-206ENST00000423161 FYB2Q5VWT5 728 aa19.38■□□□□ 0.69
SREBF1-206ENST00000423161 ANKRD40Q6AI12 368 aa19.38■□□□□ 0.69
SREBF1-206ENST00000423161 DEFB119Q8N690 84 aa19.38■□□□□ 0.69
SREBF1-206ENST00000423161 ERCC4Q92889 916 aaPredicted RBP19.38■□□□□ 0.69
SREBF1-206ENST00000423161 PILRBQ9UKJ0 227 aa19.38■□□□□ 0.69
SREBF1-206ENST00000423161 TSPAN16Q9UKR8 245 aa19.38■□□□□ 0.69
SREBF1-206ENST00000423161 RAD54BQ9Y620 910 aa19.38■□□□□ 0.69
SREBF1-206ENST00000423161 IGHV1OR15-9A0A0B4J2B8 117 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 SLC12A8A0AV02 714 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 TRIM49BA6NDI0 452 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 GFRA2O00451 464 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 ZNF217O75362 1048 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 ZBED1O96006 694 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 HOXD12P35452 270 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 BCAT1P54687 386 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 YWHAEP62258 255 aaKnown RBP19.37■□□□□ 0.69
SREBF1-206ENST00000423161 SHC2P98077 582 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 LRRC63Q05C16 580 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 ST3GAL2Q16842 350 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 SGO2Q562F6 1265 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 PEAR1Q5VY43 1037 aaPredicted RBP19.37■□□□□ 0.69
SREBF1-206ENST00000423161 SLC23A3Q6PIS1 610 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 DENND1CQ8IV53 801 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 ENGASEQ8NFI3 743 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 SMARCE1Q969G3 411 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 ULBP1Q9BZM6 244 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 HESX1Q9UBX0 185 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 ARMCX3Q9UH62 379 aaPredicted RBP19.37■□□□□ 0.69
SREBF1-206ENST00000423161 AGO1Q9UL18 857 aaKnown RBP19.37■□□□□ 0.69
SREBF1-206ENST00000423161 CYP8B1Q9UNU6 501 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 SLC27A6Q9Y2P4 619 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 PCNX2A6NKB5 2137 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 PCDH15Q96QU1 1955 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 USP24Q9UPU5 2620 aa19.37■□□□□ 0.69
SREBF1-206ENST00000423161 CEP295Q9C0D2 2601 aa19.36■□□□□ 0.69
SREBF1-206ENST00000423161 WASH3PC4AMC7 463 aa19.36■□□□□ 0.69
SREBF1-206ENST00000423161 TULP2O00295 520 aa19.36■□□□□ 0.69
SREBF1-206ENST00000423161 XPO1O14980 1071 aaKnown RBP19.36■□□□□ 0.69
SREBF1-206ENST00000423161 CFIP05156 583 aa19.36■□□□□ 0.69
SREBF1-206ENST00000423161 CD19P15391 556 aa19.36■□□□□ 0.69
SREBF1-206ENST00000423161 ENGP17813 658 aa19.36■□□□□ 0.69
SREBF1-206ENST00000423161 MAPK8P45983 427 aa19.36■□□□□ 0.69
SREBF1-206ENST00000423161 MFAP3P55082 362 aa19.36■□□□□ 0.69
SREBF1-206ENST00000423161 PDE4CQ08493 712 aa19.36■□□□□ 0.69
SREBF1-206ENST00000423161 ZNF252P-AS1Q0IIN9 211 aa19.36■□□□□ 0.69
SREBF1-206ENST00000423161 BST2Q10589 180 aaKnown RBP19.36■□□□□ 0.69
SREBF1-206ENST00000423161 PM20D1Q6GTS8 502 aa19.36■□□□□ 0.69
SREBF1-206ENST00000423161 SPATA20Q8TB22 786 aa19.36■□□□□ 0.69
SREBF1-206ENST00000423161 SLC35C1Q96A29 364 aa19.36■□□□□ 0.69
SREBF1-206ENST00000423161 GTPBP4Q9BZE4 634 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms