RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 H0YCG3 227 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 DNAJA2O60884 412 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 CLPTM1O96005 669 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 PIGRP01833 764 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 NPR1P16066 1061 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 PMLP29590 882 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 ARRB2P32121 409 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 ALDH1A3P47895 512 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 SLC1A6P48664 564 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 MYL6P60660 151 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 TMEM259Q4ZIN3 620 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 SWSAP1Q6NVH7 229 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 C16orf46Q6P387 395 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 RSPH3Q86UC2 560 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 RMDN3Q96TC7 470 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 RSAD1Q9HA92 442 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 PXMP2Q9NR77 195 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 FBXO40Q9UH90 709 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 DTNAQ9Y4J8 743 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 BTBD19C9JJ37 291 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 MAFGO15525 162 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 TRUB2O95900 331 aaKnown RBP13.13□□□□□ -0.31
CTCFL-204ENST00000422869 PSMC1P62191 440 aaKnown RBP13.13□□□□□ -0.31
CTCFL-204ENST00000422869 RPL10AP62906 217 aaKnown RBP13.13□□□□□ -0.31
CTCFL-204ENST00000422869 PRKCEQ02156 737 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 CDAN1Q8IWY9 1227 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 SEPT12Q8IYM1 358 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 ATP6V0A1Q93050 837 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 DCUN1D1Q96GG9 259 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 CPXM1Q96SM3 734 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 SORT1Q99523 831 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 RAVER2Q9HCJ3 691 aaKnown RBP13.13□□□□□ -0.31
CTCFL-204ENST00000422869 PAK5Q9P286 719 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 USP18Q9UMW8 372 aa13.13□□□□□ -0.31
CTCFL-204ENST00000422869 ZNF195O14628 629 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 APRTP07741 180 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 GABRB2P47870 512 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 MTTPP55157 894 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 TGFB2P61812 414 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 VWA5B1Q5TIE3 1220 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 OLFML2BQ68BL8 750 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 CYP4V2Q6ZWL3 525 aaPredicted RBP13.12□□□□□ -0.31
CTCFL-204ENST00000422869 XYLT1Q86Y38 959 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 CCDC60Q8IWA6 550 aaPredicted RBP13.12□□□□□ -0.31
CTCFL-204ENST00000422869 RBM12BQ8IXT5 1001 aaKnown RBP13.12□□□□□ -0.31
CTCFL-204ENST00000422869 MPP5Q8N3R9 675 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 PHTF2Q8N3S3 785 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 ZFP28Q8NHY6 868 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 PPP1R14CQ8TAE6 165 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 TMEM143Q96AN5 459 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 FRMD8Q9BZ67 464 aaPredicted RBP13.12□□□□□ -0.31
CTCFL-204ENST00000422869 MTMR12Q9C0I1 747 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 NIF3L1Q9GZT8 377 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 SDCBP2Q9H190 292 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 DHX33Q9H6R0 707 aaKnown RBP13.12□□□□□ -0.31
CTCFL-204ENST00000422869 NRDE2Q9H7Z3 1164 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 DDX18Q9NVP1 670 aaKnown RBP13.12□□□□□ -0.31
CTCFL-204ENST00000422869 PNPOQ9NVS9 261 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 LZTS1Q9Y250 596 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 H7C0C1 242 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 KCNN4O15554 427 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 ZMPSTE24O75844 475 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 ENDOD1O94919 500 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 LDHAP00338 332 aaKnown RBP13.12□□□□□ -0.31
CTCFL-204ENST00000422869 ABCD1P33897 745 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 MAGEA3P43357 314 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 ATP5OP48047 213 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 CNTN2Q02246 1040 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 DBN1Q16643 649 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 SH2D4BQ5SQS7 431 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 PDPK2PQ6A1A2 396 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 SLFN12LQ6IEE8 588 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 C1orf228Q6PIY5 440 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 SCARA5Q6ZMJ2 495 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 ZNF534Q76KX8 674 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 JDP2Q8WYK2 163 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 RTP4Q96DX8 246 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 CMTM5Q96DZ9 223 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 CIDEBQ9UHD4 219 aa13.12□□□□□ -0.31
CTCFL-204ENST00000422869 hCG_2014768A0A024R1R8 64 aa13.11□□□□□ -0.31
CTCFL-204ENST00000422869 LOC100653049A0A140TA62 436 aa13.11□□□□□ -0.31
CTCFL-204ENST00000422869 KRT34O76011 436 aa13.11□□□□□ -0.31
CTCFL-204ENST00000422869 ERBB2P04626 1255 aa13.11□□□□□ -0.31
CTCFL-204ENST00000422869 CDK4P11802 303 aa13.11□□□□□ -0.31
CTCFL-204ENST00000422869 POLR2BP30876 1174 aaKnown RBP13.11□□□□□ -0.31
CTCFL-204ENST00000422869 TNFSF9P41273 254 aa13.11□□□□□ -0.31
CTCFL-204ENST00000422869 MAGEA6P43360 314 aa13.11□□□□□ -0.31
CTCFL-204ENST00000422869 GK3PQ14409 553 aa13.11□□□□□ -0.31
CTCFL-204ENST00000422869 PCLAFQ15004 111 aa13.11□□□□□ -0.31
CTCFL-204ENST00000422869 EMC2Q15006 297 aa13.11□□□□□ -0.31
CTCFL-204ENST00000422869 MYLK3Q32MK0 819 aa13.11□□□□□ -0.31
CTCFL-204ENST00000422869 MTERF2Q49AM1 385 aa13.11□□□□□ -0.31
CTCFL-204ENST00000422869 RAB6CQ53S08 254 aa13.11□□□□□ -0.31
CTCFL-204ENST00000422869 TIFABQ6ZNK6 161 aa13.11□□□□□ -0.31
CTCFL-204ENST00000422869 PQLC1Q8N2U9 271 aa13.11□□□□□ -0.31
CTCFL-204ENST00000422869 GSDMBQ8TAX9 411 aa13.11□□□□□ -0.31
CTCFL-204ENST00000422869 GRIP2Q9C0E4 1043 aa13.11□□□□□ -0.31
CTCFL-204ENST00000422869 SENP6Q9GZR1 1112 aaPredicted RBP13.11□□□□□ -0.31
CTCFL-204ENST00000422869 RAB6CQ9H0N0 254 aa13.11□□□□□ -0.31
CTCFL-204ENST00000422869 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms