RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 FOXD4Q12950 439 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 SLMAPQ14BN4 828 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 SEPT7Q16181 437 aaKnown RBP5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 PABPC1LQ4VXU2 614 aaKnown RBP5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 PPM1LQ5SGD2 360 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 ARHGAP40Q5TG30 622 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 LIN9Q5TKA1 542 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 BROXQ5VW32 411 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 ABHD17CQ6PCB6 329 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 SPATA21Q7Z572 469 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 APBB1IPQ7Z5R6 666 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 ZC3H18Q86VM9 953 aaKnown RBP5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 FAM228AQ86W67 206 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 SYT12Q8IV01 421 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 MFN1Q8IWA4 741 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 PPM1KQ8N3J5 372 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 CCDC112Q8NEF3 446 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 SHKBP1Q8TBC3 707 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 DEPDC1BQ8WUY9 529 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 JAKMIP2Q96AA8 810 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 MCRS1Q96EZ8 462 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 FOXP3Q9BZS1 431 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 TRIT1Q9H3H1 467 aaKnown RBP5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 NRDE2Q9H7Z3 1164 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 RXFP1Q9HBX9 757 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 METTL14Q9HCE5 456 aaKnown RBP5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 FSCN3Q9NQT6 498 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 KCND1Q9NSA2 647 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 ARGLU1Q9NWB6 273 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 ZSWIM5Q9P217 1185 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 DBNLQ9UJU6 430 aaKnown RBP5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 PCDHA8Q9Y5H6 950 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 SLC4A4Q9Y6R1 1079 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 PCNX2A6NKB5 2137 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 SMIM35A0A1B0GVV1 85 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 SPECC1L-ADORA2AF8WAN1 911 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 AQP7O14520 342 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 CCL16O15467 120 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 SUV39H1O43463 412 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 MARCH6O60337 910 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 RTN3O95197 1032 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 APBB3O95704 486 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 CEACAM5P06731 702 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 GSTM1P09488 218 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 CCDC159P0C7I6 412 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 JMJD7P0C870 316 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 HSPD1P10809 573 aaKnown RBP5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 LCP1P13796 627 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 PSMC3P17980 439 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 BCKDHBP21953 392 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 PAX3P23760 479 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 HOXD12P35452 270 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 SEPHS1P49903 392 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 NEK4P51957 841 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 GPR85P60893 370 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 GUCY1A3Q02108 690 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 SP4Q02446 784 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 MTX1Q13505 466 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 PON2Q15165 354 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 SBK1Q52WX2 424 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 USP39Q53GS9 565 aaKnown RBP5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 WLSQ5T9L3 541 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 HHATQ5VTY9 493 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 CDCA2Q69YH5 1023 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 ISM2Q6H9L7 571 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 LILRA6Q6PI73 481 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 VITQ6UXI7 678 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 CCDC80Q76M96 950 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 RALGPS2Q86X27 583 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 AHI1Q8N157 1196 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 MAB21L3Q8N8X9 362 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 OR2I1PQ8NGU4 316 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 MAGEC3Q8TD91 643 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 ZFAND2BQ8WV99 257 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 TBC1D5Q92609 795 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 UBE2FQ969M7 185 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 OSBPL9Q96SU4 736 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 GAD1Q99259 594 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 ZFYVE21Q9BQ24 234 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 PDCD2LQ9BRP1 358 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 RWDD1Q9H446 243 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 CPNE5Q9HCH3 593 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 GPR27Q9NS67 375 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 TBC1D13Q9NVG8 400 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 DNAJB4Q9UDY4 337 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 EBF1Q9UH73 591 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 TCFL5Q9UL49 500 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 MYO6Q9UM54 1294 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 STX8Q9UNK0 236 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 INVSQ9Y283 1065 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 EML5Q05BV3 1969 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 SDK1Q7Z5N4 2213 aa5.92□□□□□ -1.46
ECHDC1-206ENST00000417628 MYBPHLA2RUH7 354 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 B4E1Z4 1266 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 LIN7AO14910 233 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 CHUKO15111 745 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 FGF10O15520 208 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 TIMM44O43615 452 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms