RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 ANKRD52Q8NB46 1076 aa22.88■■□□□ 1.25
ACTB-203ENST00000417101 IPO4Q8TEX9 1081 aaKnown RBP22.88■■□□□ 1.25
ACTB-203ENST00000417101 P2RY11Q96G91 374 aa22.88■■□□□ 1.25
ACTB-203ENST00000417101 TSG101Q99816 390 aa22.88■■□□□ 1.25
ACTB-203ENST00000417101 NUSAP1Q9BXS6 441 aaKnown RBP22.88■■□□□ 1.25
ACTB-203ENST00000417101 UBXN6Q9BZV1 441 aa22.88■■□□□ 1.25
ACTB-203ENST00000417101 CACNA2D2Q9NY47 1150 aa22.88■■□□□ 1.25
ACTB-203ENST00000417101 ZNF510Q9Y2H8 683 aa22.88■■□□□ 1.25
ACTB-203ENST00000417101 ATXN2Q99700 1313 aaKnown RBP22.87■■□□□ 1.25
ACTB-203ENST00000417101 GIPC1O14908 333 aa22.87■■□□□ 1.25
ACTB-203ENST00000417101 NDUFV2P19404 249 aa22.87■■□□□ 1.25
ACTB-203ENST00000417101 ITPKAP23677 461 aa22.87■■□□□ 1.25
ACTB-203ENST00000417101 CORO1AP31146 461 aaKnown RBP22.87■■□□□ 1.25
ACTB-203ENST00000417101 SLC8A3P57103 927 aa22.87■■□□□ 1.25
ACTB-203ENST00000417101 UAP1L1Q3KQV9 507 aa22.87■■□□□ 1.25
ACTB-203ENST00000417101 RAB41Q5JT25 222 aa22.87■■□□□ 1.25
ACTB-203ENST00000417101 ANKRD40Q6AI12 368 aa22.87■■□□□ 1.25
ACTB-203ENST00000417101 ARHGAP18Q8N392 663 aa22.87■■□□□ 1.25
ACTB-203ENST00000417101 GABRG3Q99928 467 aa22.87■■□□□ 1.25
ACTB-203ENST00000417101 DCLK3Q9C098 648 aa22.87■■□□□ 1.25
ACTB-203ENST00000417101 FAM124BQ9H5Z6 455 aaPredicted RBP22.87■■□□□ 1.25
ACTB-203ENST00000417101 CD248Q9HCU0 757 aa22.87■■□□□ 1.25
ACTB-203ENST00000417101 RAD54BQ9Y620 910 aa22.87■■□□□ 1.25
ACTB-203ENST00000417101 GOLGA6L4A6NEF3 574 aa22.86■■□□□ 1.25
ACTB-203ENST00000417101 SLC16A3O15427 465 aaKnown RBP22.86■■□□□ 1.25
ACTB-203ENST00000417101 AP5Z1O43299 807 aa22.86■■□□□ 1.25
ACTB-203ENST00000417101 CHKAP35790 457 aa22.86■■□□□ 1.25
ACTB-203ENST00000417101 PMS1P54277 932 aaKnown RBP22.86■■□□□ 1.25
ACTB-203ENST00000417101 YWHAGP61981 247 aaKnown RBP eCLIP22.86■■□□□ 1.254e-11■□□□□ 8.1
ACTB-203ENST00000417101 LMAN2Q12907 356 aa22.86■■□□□ 1.25
ACTB-203ENST00000417101 GOLGA7BQ2TAP0 167 aa22.86■■□□□ 1.25
ACTB-203ENST00000417101 SH3PXD2AQ5TCZ1 1133 aa22.86■■□□□ 1.25
ACTB-203ENST00000417101 SLC36A4Q6YBV0 504 aa22.86■■□□□ 1.25
ACTB-203ENST00000417101 RSRC2Q7L4I2 434 aaKnown RBP22.86■■□□□ 1.25
ACTB-203ENST00000417101 ERCC4Q92889 916 aaPredicted RBP22.86■■□□□ 1.25
ACTB-203ENST00000417101 GSDMAQ96QA5 445 aa22.86■■□□□ 1.25
ACTB-203ENST00000417101 MARCH2Q9P0N8 246 aa22.86■■□□□ 1.25
ACTB-203ENST00000417101 FBXO10Q9UK96 956 aa22.86■■□□□ 1.25
ACTB-203ENST00000417101 PILRBQ9UKJ0 227 aa22.86■■□□□ 1.25
ACTB-203ENST00000417101 COQ4Q9Y3A0 265 aa22.86■■□□□ 1.25
ACTB-203ENST00000417101 PLXND1Q9Y4D7 1925 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 IGHV1OR15-9A0A0B4J2B8 117 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 WASH3PC4AMC7 463 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 TULP2O00295 520 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 KRT37O76014 449 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 SMC2O95347 1197 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 PENKP01210 267 aaPredicted RBP22.85■■□□□ 1.25
ACTB-203ENST00000417101 DPP6P42658 865 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 MAPK8P45983 427 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 TKTL1P51854 596 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 SHC2P98077 582 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 FKBP3Q00688 224 aaKnown RBP22.85■■□□□ 1.25
ACTB-203ENST00000417101 CUL2Q13617 745 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 ST3GAL2Q16842 350 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 COBLL1Q53SF7 1204 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 FYB2Q5VWT5 728 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 DENND1CQ8IV53 801 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 ZC3H3Q8IXZ2 948 aaKnown RBP22.85■■□□□ 1.25
ACTB-203ENST00000417101 ULBP1Q9BZM6 244 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 SLC6A17Q9H1V8 727 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 TSPAN16Q9UKR8 245 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 AGO1Q9UL18 857 aaKnown RBP22.85■■□□□ 1.25
ACTB-203ENST00000417101 STRIP2Q9ULQ0 834 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 CYP8B1Q9UNU6 501 aa22.85■■□□□ 1.25
ACTB-203ENST00000417101 FRYQ5TBA9 3013 aa22.84■■□□□ 1.25
ACTB-203ENST00000417101 SLC12A8A0AV02 714 aa22.84■■□□□ 1.25
ACTB-203ENST00000417101 TRIM49BA6NDI0 452 aa22.84■■□□□ 1.25
ACTB-203ENST00000417101 GFRA2O00451 464 aa22.84■■□□□ 1.25
ACTB-203ENST00000417101 ZNF217O75362 1048 aa22.84■■□□□ 1.25
ACTB-203ENST00000417101 ZBED1O96006 694 aa22.84■■□□□ 1.25
ACTB-203ENST00000417101 CFIP05156 583 aa22.84■■□□□ 1.25
ACTB-203ENST00000417101 ENGP17813 658 aa22.84■■□□□ 1.25
ACTB-203ENST00000417101 PDE4CQ08493 712 aa22.84■■□□□ 1.25
ACTB-203ENST00000417101 ENGASEQ8NFI3 743 aa22.84■■□□□ 1.25
ACTB-203ENST00000417101 NDRG1Q92597 394 aaKnown RBP22.84■■□□□ 1.25
ACTB-203ENST00000417101 SMARCE1Q969G3 411 aa22.84■■□□□ 1.25
ACTB-203ENST00000417101 ARMCX3Q9UH62 379 aaPredicted RBP22.84■■□□□ 1.25
ACTB-203ENST00000417101 SLC27A6Q9Y2P4 619 aa22.84■■□□□ 1.25
ACTB-203ENST00000417101 USP24Q9UPU5 2620 aa22.83■■□□□ 1.25
ACTB-203ENST00000417101 CD19P15391 556 aa22.83■■□□□ 1.25
ACTB-203ENST00000417101 HOXD12P35452 270 aa22.83■■□□□ 1.25
ACTB-203ENST00000417101 BCAT1P54687 386 aa22.83■■□□□ 1.25
ACTB-203ENST00000417101 MFAP3P55082 362 aa22.83■■□□□ 1.25
ACTB-203ENST00000417101 ZNF33AQ06730 810 aa22.83■■□□□ 1.25
ACTB-203ENST00000417101 ZNF252P-AS1Q0IIN9 211 aa22.83■■□□□ 1.25
ACTB-203ENST00000417101 LRMPQ12912 555 aa22.83■■□□□ 1.25
ACTB-203ENST00000417101 GEN1Q17RS7 908 aa22.83■■□□□ 1.25
ACTB-203ENST00000417101 SGO2Q562F6 1265 aa22.83■■□□□ 1.25
ACTB-203ENST00000417101 PEAR1Q5VY43 1037 aaPredicted RBP22.83■■□□□ 1.25
ACTB-203ENST00000417101 PM20D1Q6GTS8 502 aa22.83■■□□□ 1.25
ACTB-203ENST00000417101 SLC23A3Q6PIS1 610 aa22.83■■□□□ 1.25
ACTB-203ENST00000417101 SPATA20Q8TB22 786 aa22.83■■□□□ 1.25
ACTB-203ENST00000417101 HESX1Q9UBX0 185 aa22.83■■□□□ 1.25
ACTB-203ENST00000417101 STON1Q9Y6Q2 735 aa22.83■■□□□ 1.25
ACTB-203ENST00000417101 TNRC6BQ9UPQ9 1833 aaKnown RBP22.82■■□□□ 1.24
ACTB-203ENST00000417101 XPO1O14980 1071 aaKnown RBP22.82■■□□□ 1.24
ACTB-203ENST00000417101 CSRP1P21291 193 aaKnown RBP22.82■■□□□ 1.24
ACTB-203ENST00000417101 YWHAEP62258 255 aaKnown RBP22.82■■□□□ 1.24
ACTB-203ENST00000417101 LRRC63Q05C16 580 aa22.82■■□□□ 1.24
ACTB-203ENST00000417101 KIAA1324Q6UXG2 1013 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms