RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 CHP1Q99653 195 aa12.44□□□□□ -0.42
ATG4B-207ENST00000415107 KXD1Q9BQD3 176 aa12.44□□□□□ -0.42
ATG4B-207ENST00000415107 DDX23Q9BUQ8 820 aaKnown RBP12.44□□□□□ -0.42
ATG4B-207ENST00000415107 TRMT61BQ9BVS5 477 aaKnown RBP12.44□□□□□ -0.42
ATG4B-207ENST00000415107 PLA2G2FQ9BZM2 168 aa12.44□□□□□ -0.42
ATG4B-207ENST00000415107 DCLK3Q9C098 648 aa12.44□□□□□ -0.42
ATG4B-207ENST00000415107 NACA2Q9H009 215 aa12.44□□□□□ -0.42
ATG4B-207ENST00000415107 THG1LQ9NWX6 298 aaKnown RBP12.44□□□□□ -0.42
ATG4B-207ENST00000415107 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.44□□□□□ -0.42
ATG4B-207ENST00000415107 NAALADL1Q9UQQ1 740 aa12.44□□□□□ -0.42
ATG4B-207ENST00000415107 TLR6Q9Y2C9 796 aa12.44□□□□□ -0.42
ATG4B-207ENST00000415107 SCINQ9Y6U3 715 aa12.44□□□□□ -0.42
ATG4B-207ENST00000415107 C2CD4BA6NLJ0 364 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 STC2O76061 302 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 ENDOD1O94919 500 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 TRUB2O95900 331 aaKnown RBP12.43□□□□□ -0.42
ATG4B-207ENST00000415107 ASGR2P07307 311 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 KRT3P12035 628 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 RRM1P23921 792 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 FLT3P36888 993 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 TAF5Q15542 800 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 SLC25A52Q3SY17 297 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 DCAF6Q58WW2 860 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 OTUD1Q5VV17 481 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-207ENST00000415107 SYPL2Q5VXT5 272 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 DNAJC24Q6P3W2 148 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 C1orf228Q6PIY5 440 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 TMEM139Q8IV31 216 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 DEFB106AQ8N104 65 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 EDEM1Q92611 657 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.43□□□□□ -0.42
ATG4B-207ENST00000415107 RPP25Q9BUL9 199 aaKnown RBP12.43□□□□□ -0.42
ATG4B-207ENST00000415107 SMG9Q9H0W8 520 aaKnown RBP12.43□□□□□ -0.42
ATG4B-207ENST00000415107 DEF6Q9H4E7 631 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 MRPL47Q9HD33 250 aaKnown RBP12.43□□□□□ -0.42
ATG4B-207ENST00000415107 PARVAQ9NVD7 372 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 RASAL2Q9UJF2 1139 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 LSM7Q9UK45 103 aaKnown RBP12.43□□□□□ -0.42
ATG4B-207ENST00000415107 INTUQ9ULD6 942 aa12.43□□□□□ -0.42
ATG4B-207ENST00000415107 COL4A3Q01955 1670 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 AKR1B10O60218 316 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 F9P00740 461 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 CYP1A2P05177 515 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 SLC2A3P11169 496 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 GLULP15104 373 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 GBP1P32455 592 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 GFPT1Q06210 699 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-207ENST00000415107 MAMLD1Q13495 774 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 GSE1Q14687 1217 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 PPP2R5DQ14738 602 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 TCEAL1Q15170 157 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 EML3Q32P44 896 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 C2CD6Q53TS8 623 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 CCDC122Q5T0U0 273 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 ACBD5Q5T8D3 534 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-207ENST00000415107 TRNP1Q6NT89 227 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 STRADAQ7RTN6 431 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 TAC4Q86UU9 113 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 UNC45BQ8IWX7 931 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 CPXM2Q8N436 756 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 RSAD2Q8WXG1 361 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 CENPIQ92674 756 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-207ENST00000415107 PDLIM2Q96JY6 352 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 FCRL2Q96LA5 508 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-207ENST00000415107 NECAB3Q96P71 396 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-207ENST00000415107 SELENOOQ9BVL4 669 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 METTL5Q9NRN9 209 aaKnown RBP12.42□□□□□ -0.42
ATG4B-207ENST00000415107 CFAP97Q9P2B7 532 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 WNT16Q9UBV4 365 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 LCMT1Q9UIC8 334 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 NUDT5Q9UKK9 219 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 SH3BP1Q9Y3L3 701 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 PAXBP1Q9Y5B6 917 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 BDP1A6H8Y1 2624 aa12.42□□□□□ -0.42
ATG4B-207ENST00000415107 MYO10Q9HD67 2058 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 SLC12A8A0AV02 714 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 GFRA2O00451 464 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 ZNF263O14978 683 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 MDM4O15151 490 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 DCXO43602 365 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 TMEM253P0C7T8 217 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 ALADP13716 330 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 GDI1P31150 447 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 SDC4P31431 198 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 CYLC1P35663 651 aaPredicted RBP12.41□□□□□ -0.42
ATG4B-207ENST00000415107 ZNF143P52747 638 aaPredicted RBP12.41□□□□□ -0.42
ATG4B-207ENST00000415107 BRMS1LQ5PSV4 323 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 RNF43Q68DV7 783 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 CC2D1AQ6P1N0 951 aaPredicted RBP12.41□□□□□ -0.42
ATG4B-207ENST00000415107 MIB1Q86YT6 1006 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 YAF2Q8IY57 180 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 CCDC112Q8NEF3 446 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 ATP2A3Q93084 1043 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 ZNF653Q96CK0 615 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 ASIC4Q96FT7 647 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 BRD9Q9H8M2 597 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 GKN1Q9NS71 199 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.41□□□□□ -0.42
ATG4B-207ENST00000415107 SMPD4Q9NXE4 827 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 MARK1Q9P0L2 795 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms