RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 RLIMQ9NVW2 624 aa5.18□□□□□ -1.58
PTPRK-209ENST00000415046 SIDT1Q9NXL6 827 aaKnown RBP5.18□□□□□ -1.58
PTPRK-209ENST00000415046 PGAP2Q9UHJ9 254 aa5.18□□□□□ -1.58
PTPRK-209ENST00000415046 SERPINB13Q9UIV8 391 aa5.18□□□□□ -1.58
PTPRK-209ENST00000415046 THSD7BQ9C0I4 1608 aa5.18□□□□□ -1.58
PTPRK-209ENST00000415046 COL11A1P12107 1806 aaPredicted RBP5.18□□□□□ -1.58
PTPRK-209ENST00000415046 PARP14Q460N5 1801 aa5.18□□□□□ -1.58
PTPRK-209ENST00000415046 CNTNAP1P78357 1384 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 ZNFX1Q9P2E3 1918 aaKnown RBP5.17□□□□□ -1.58
PTPRK-209ENST00000415046 NT5C1B-RDH14C9J2C7 533 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 GCOM1H8Y6P7 765 aaPredicted RBP5.17□□□□□ -1.58
PTPRK-209ENST00000415046 F2RL2O00254 374 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 URI1O94763 535 aaPredicted RBP5.17□□□□□ -1.58
PTPRK-209ENST00000415046 RPLP2P05387 115 aaKnown RBP5.17□□□□□ -1.58
PTPRK-209ENST00000415046 MALP21145 153 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 NF2P35240 595 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 MMP14P50281 582 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 HUNKP57058 714 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 DYNLL1P63167 89 aaKnown RBP5.17□□□□□ -1.58
PTPRK-209ENST00000415046 NUCB1Q02818 461 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 SRSF4Q08170 494 aaKnown RBP5.17□□□□□ -1.58
PTPRK-209ENST00000415046 MTMR1Q13613 665 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 TTF1Q15361 905 aaPredicted RBP5.17□□□□□ -1.58
PTPRK-209ENST00000415046 SLC4A8Q2Y0W8 1093 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 APOBEC3HQ6NTF7 200 aaKnown RBP5.17□□□□□ -1.58
PTPRK-209ENST00000415046 C1QL2Q7Z5L3 287 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 CHD1LQ86WJ1 897 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 SKAP1Q86WV1 359 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 TEX11Q8IYF3 940 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 CCDC136Q96JN2 1154 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 PBKQ96KB5 322 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 SMOQ99835 787 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 FSD1Q9BTV5 496 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 C1QTNF7Q9BXJ2 289 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 TMEM39BQ9GZU3 492 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 DEFB129Q9H1M3 183 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 MAN1C1Q9NR34 630 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 AATFQ9NY61 560 aaKnown RBP eCLIP5.17□□□□□ -1.58
PTPRK-209ENST00000415046 ADAM21Q9UKJ8 722 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.17□□□□□ -1.58
PTPRK-209ENST00000415046 MRFAP1Q9Y605 127 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 WNT6Q9Y6F9 365 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 ZSWIM8A7E2V4 1837 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 GAKO14976 1311 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 TTC41PQ6P2S7 1318 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 ADGRA2Q96PE1 1338 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 ZNF532Q9HCE3 1301 aa5.17□□□□□ -1.58
PTPRK-209ENST00000415046 RFX7Q2KHR2 1363 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 LOC285556D6RIA3 1793 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 A0A0B4J269 797 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 UBE2Q2LH0YL09 131 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 GABRDO14764 452 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 ERC2O15083 957 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 LPOP22079 712 aaPredicted RBP5.16□□□□□ -1.58
PTPRK-209ENST00000415046 CYP2C19P33261 490 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 ABCG1P45844 678 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 FXR1P51114 621 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTPRK-209ENST00000415046 PDE1AP54750 535 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 ADKP55263 362 aaKnown RBP5.16□□□□□ -1.58
PTPRK-209ENST00000415046 TUBB3Q13509 450 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 TNFAIP1Q13829 316 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 PTPROQ16827 1216 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 SLC9C2Q5TAH2 1124 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 CST9Q5W186 159 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 FCRLBQ6BAA4 426 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 AMIGO2Q86SJ2 522 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 TTC7BQ86TV6 843 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 DPF1Q92782 380 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 OSBPL9Q96SU4 736 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTPRK-209ENST00000415046 ARMT1Q9H993 441 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 GBA2Q9HCG7 927 aaPredicted RBP5.16□□□□□ -1.58
PTPRK-209ENST00000415046 DDX4Q9NQI0 724 aaKnown RBP5.16□□□□□ -1.58
PTPRK-209ENST00000415046 ETAA1Q9NY74 926 aa5.16□□□□□ -1.58
PTPRK-209ENST00000415046 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTPRK-209ENST00000415046 GREB1LQ9C091 1923 aaPredicted RBP5.16□□□□□ -1.58
PTPRK-209ENST00000415046 BAZ2BQ9UIF8 2168 aaKnown RBP5.16□□□□□ -1.58
PTPRK-209ENST00000415046 SMCHD1A6NHR9 2005 aa5.15□□□□□ -1.58
PTPRK-209ENST00000415046 GPR75-ASB3A0A0A6YYF3 556 aa5.15□□□□□ -1.59
PTPRK-209ENST00000415046 MANSC4A6NHS7 340 aaPredicted RBP5.15□□□□□ -1.59
PTPRK-209ENST00000415046 WDHD1O75717 1129 aaPredicted RBP5.15□□□□□ -1.59
PTPRK-209ENST00000415046 MBD4O95243 580 aa5.15□□□□□ -1.59
PTPRK-209ENST00000415046 BAG3O95817 575 aa5.15□□□□□ -1.59
PTPRK-209ENST00000415046 CHEK2O96017 543 aa5.15□□□□□ -1.59
PTPRK-209ENST00000415046 PRKCGP05129 697 aa5.15□□□□□ -1.59
PTPRK-209ENST00000415046 ADD2P35612 726 aa5.15□□□□□ -1.59
PTPRK-209ENST00000415046 NDUFV1P49821 464 aa5.15□□□□□ -1.59
PTPRK-209ENST00000415046 RHBDL3P58872 404 aa5.15□□□□□ -1.59
PTPRK-209ENST00000415046 DSC2Q02487 901 aa5.15□□□□□ -1.59
PTPRK-209ENST00000415046 SNAPC2Q13487 334 aa5.15□□□□□ -1.59
PTPRK-209ENST00000415046 PCBP2Q15366 365 aaKnown RBP eCLIP5.15□□□□□ -1.593e-6■■■□□ 15.9
PTPRK-209ENST00000415046 KHDC1Q4VXA5 237 aaKnown RBP5.15□□□□□ -1.59
PTPRK-209ENST00000415046 ZSCAN25Q6NSZ9 544 aa5.15□□□□□ -1.59
PTPRK-209ENST00000415046 KBTBD3Q8NAB2 608 aa5.15□□□□□ -1.59
PTPRK-209ENST00000415046 FAM151AQ8WW52 585 aa5.15□□□□□ -1.59
PTPRK-209ENST00000415046 SMG7Q92540 1137 aaKnown RBP5.15□□□□□ -1.59
PTPRK-209ENST00000415046 RILPL2Q969X0 211 aa5.15□□□□□ -1.59
PTPRK-209ENST00000415046 HAPLN3Q96S86 360 aa5.15□□□□□ -1.59
PTPRK-209ENST00000415046 VRK1Q99986 396 aaPredicted RBP5.15□□□□□ -1.59
PTPRK-209ENST00000415046 ALG8Q9BVK2 526 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms