RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 FBXO2Q9UK22 296 aaPredicted RBP10.09□□□□□ -0.79
RFFL-203ENST00000413582 FBXO10Q9UK96 956 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 ATP6V1DQ9Y5K8 247 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 COL5A1P20908 1838 aaPredicted RBP10.08□□□□□ -0.8
RFFL-203ENST00000413582 TENM4Q6N022 2769 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 A0A1B0GVT2 93 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 GOLGA8CPA6NN73 597 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 AP1G2O75843 785 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 BEST1O76090 585 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 ZSCAN22P10073 491 aaPredicted RBP10.08□□□□□ -0.8
RFFL-203ENST00000413582 TNNI1P19237 187 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 MYL6P60660 151 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 CYP24A1Q07973 514 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 PSMD6Q15008 389 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 SNRNP35Q16560 246 aaKnown RBP10.08□□□□□ -0.8
RFFL-203ENST00000413582 TMPRSS6Q8IU80 811 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 FUKQ8N0W3 1084 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 PDCD7Q8N8D1 485 aaKnown RBP10.08□□□□□ -0.8
RFFL-203ENST00000413582 PIP4K2CQ8TBX8 421 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 RHBDD1Q8TEB9 315 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 SLC39A7Q92504 469 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 DCBLD2Q96PD2 775 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 SMOQ99835 787 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 MED10Q9BTT4 135 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 KIAA1586Q9HCI6 787 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.08□□□□□ -0.8
RFFL-203ENST00000413582 OSER1Q9NX31 292 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 THAP10Q9P2Z0 257 aaPredicted RBP10.08□□□□□ -0.8
RFFL-203ENST00000413582 NXF1Q9UBU9 619 aaKnown RBP10.08□□□□□ -0.8
RFFL-203ENST00000413582 LSM7Q9UK45 103 aaKnown RBP10.08□□□□□ -0.8
RFFL-203ENST00000413582 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.08□□□□□ -0.8
RFFL-203ENST00000413582 SLC27A6Q9Y2P4 619 aa10.08□□□□□ -0.8
RFFL-203ENST00000413582 MGAQ8IWI9 3026 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 A0A087X0B3 334 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 E9PAM4 449 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 TK2O00142 265 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 NPC1O15118 1278 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 MDM4O15151 490 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 ATXN7O15265 892 aaPredicted RBP10.07□□□□□ -0.8
RFFL-203ENST00000413582 CYP26A1O43174 497 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 TNFSF14O43557 240 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 PENKP01210 267 aaPredicted RBP10.07□□□□□ -0.8
RFFL-203ENST00000413582 CCDC130P13994 396 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 ACO1P21399 889 aaKnown RBP10.07□□□□□ -0.8
RFFL-203ENST00000413582 PRKCHP24723 683 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 OXTRP30559 389 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 ATICP31939 592 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 GRK6P43250 576 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 CSNK1EP49674 416 aaKnown RBP10.07□□□□□ -0.8
RFFL-203ENST00000413582 AFF3P51826 1226 aaKnown RBP10.07□□□□□ -0.8
RFFL-203ENST00000413582 ZNF132P52740 706 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 COPAP53621 1224 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 MFAP3P55082 362 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 GOLGA8FQ08AF8 430 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 GOLGA8DPQ0D2H9 430 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 PKP1Q13835 747 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 GEN1Q17RS7 908 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 KIF19Q2TAC6 998 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 ATL3Q6DD88 541 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 GPRIN1Q7Z2K8 1008 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 CACUL1Q86Y37 369 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 RBBP8NLQ8NC74 664 aaPredicted RBP10.07□□□□□ -0.8
RFFL-203ENST00000413582 ZNF516Q92618 1163 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 PRCCQ92733 491 aaPredicted RBP10.07□□□□□ -0.8
RFFL-203ENST00000413582 HPS3Q969F9 1004 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 SIPA1Q96FS4 1042 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 CLIC6Q96NY7 704 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 SDCBP2Q9H190 292 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 PCED1AQ9H1Q7 454 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 FBXO44Q9H4M3 255 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 VRTNQ9H8Y1 702 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 CSNK1G1Q9HCP0 422 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 TLR8Q9NR97 1041 aaKnown RBP10.07□□□□□ -0.8
RFFL-203ENST00000413582 AGPAT3Q9NRZ7 376 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 PLK2Q9NYY3 685 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 ZDHHC9Q9Y397 364 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 SNX11Q9Y5W9 270 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 CLIC4Q9Y696 253 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 SPTA1P02549 2419 aa10.07□□□□□ -0.8
RFFL-203ENST00000413582 ARID1BQ8NFD5 2236 aaPredicted RBP10.06□□□□□ -0.8
RFFL-203ENST00000413582 MYO18BQ8IUG5 2567 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 MYLKQ15746 1914 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 EIF3DO15371 548 aaKnown RBP eCLIP10.06□□□□□ -0.8
RFFL-203ENST00000413582 PCDHGA12O60330 932 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 STC2O76061 302 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 F13A1P00488 732 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 PLA2G2AP14555 144 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 ITPKBP27987 946 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 ATP5C1P36542 298 aaKnown RBP10.06□□□□□ -0.8
RFFL-203ENST00000413582 TXLNAP40222 546 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 STAT6P42226 847 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 CCT8P50990 548 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 CDH8P55286 799 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 TRPC3Q13507 836 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 ZNF234Q14588 700 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 ZNF699Q32M78 642 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 CCDC157Q569K6 752 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 FYB2Q5VWT5 728 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 KLHDC10Q6PID8 442 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 DHRS13Q6UX07 377 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms