RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 MYH15Q9Y2K3 1946 aa5.73□□□□□ -1.49
LINC00342-201ENST00000412393 TECTAO75443 2155 aa5.73□□□□□ -1.49
LINC00342-201ENST00000412393 DOCK8Q8NF50 2099 aa5.73□□□□□ -1.49
LINC00342-201ENST00000412393 ZMYM2Q9UBW7 1377 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 MUC3AQ02505 3323 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 FAM237AA0A1B0GTK4 181 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 VWA3AA6NCI4 1184 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 GOLGA6L4A6NEF3 574 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 K7ERI5 159 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 ACKR2O00590 384 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 MAP2K7O14733 419 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 SOD2P04179 222 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 EDN1P05305 212 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 SSBP05455 408 aaKnown RBP eCLIP5.72□□□□□ -1.49
LINC00342-201ENST00000412393 URODP06132 367 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 GSTM1P09488 218 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 CNPP09543 421 aaKnown RBP5.72□□□□□ -1.49
LINC00342-201ENST00000412393 GLI4P10075 376 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 EPCAMP16422 314 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 RPL13P26373 211 aaKnown RBP5.72□□□□□ -1.49
LINC00342-201ENST00000412393 KLRC2P26717 231 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 PMLP29590 882 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 POLR2BP30876 1174 aaKnown RBP5.72□□□□□ -1.49
LINC00342-201ENST00000412393 L1CAMP32004 1257 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 EFNA5P52803 228 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 PEX3P56589 373 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 FAM160A1Q05DH4 1040 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 DSC1Q08554 894 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 GRIK3Q13003 919 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 ZRSR1Q15695 479 aaKnown RBP5.72□□□□□ -1.49
LINC00342-201ENST00000412393 DCAF4L1Q3SXM0 396 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 HERC4Q5GLZ8 1057 aaPredicted RBP5.72□□□□□ -1.49
LINC00342-201ENST00000412393 RARS2Q5T160 578 aaKnown RBP5.72□□□□□ -1.49
LINC00342-201ENST00000412393 EEF1DP3Q658K8 133 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 E4F1Q66K89 784 aaPredicted RBP5.72□□□□□ -1.49
LINC00342-201ENST00000412393 CES5AQ6NT32 575 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 TRIM65Q6PJ69 517 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 KCNK18Q7Z418 384 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 PPFIBP1Q86W92 1011 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 DHX40Q8IX18 779 aaKnown RBP5.72□□□□□ -1.49
LINC00342-201ENST00000412393 DRC7Q8IY82 874 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 NETO2Q8NC67 525 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 GOLGA5Q8TBA6 731 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 SLC22A17Q8WUG5 538 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 CDK5RAP3Q96JB5 506 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 RPGRIP1Q96KN7 1286 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 DHRS1Q96LJ7 313 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 KLHL5Q96PQ7 755 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 ADPGKQ9BRR6 497 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 MMTAG2Q9BU76 263 aaKnown RBP5.72□□□□□ -1.49
LINC00342-201ENST00000412393 KIFC3Q9BVG8 833 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 HERC2P3Q9BVR0 1158 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 COLEC11Q9BWP8 271 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 CCDC113Q9H0I3 377 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 SEMA4AQ9H3S1 761 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 PDZD7Q9H5P4 517 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 MRPL17Q9NRX2 175 aaKnown RBP5.72□□□□□ -1.49
LINC00342-201ENST00000412393 MARCH5Q9NX47 278 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 SNTG2Q9NY99 539 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 CWC15Q9P013 229 aaKnown RBP5.72□□□□□ -1.49
LINC00342-201ENST00000412393 MUTYHQ9UIF7 546 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 SSX2IPQ9Y2D8 614 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 ANK1P16157 1881 aa5.72□□□□□ -1.49
LINC00342-201ENST00000412393 ZNF318Q5VUA4 2279 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 CCDC151A5D8V7 595 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 MROH6A6NGR9 719 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 CCDC169A6NNP5 214 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 LOC730098B7Z3J9 87 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 F8W810 466 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 HIP1RO75146 1068 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 TADA3O75528 432 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 RECQL4O94761 1208 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 BMP15O95972 392 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 MTHFRP42898 656 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 NPTX2P47972 431 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 GLUD2P49448 558 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 DAB2P98082 770 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 ITIH3Q06033 890 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 MAPK7Q13164 816 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 PSMD2Q13200 908 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 DMP1Q13316 513 aaPredicted RBP5.71□□□□□ -1.5
LINC00342-201ENST00000412393 TUSC3Q13454 348 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 BRD3Q15059 726 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 CT47A1Q5JQC4 288 aaPredicted RBP5.71□□□□□ -1.5
LINC00342-201ENST00000412393 ATAT1Q5SQI0 421 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 HYIQ5T013 277 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 ATF7IP2Q5U623 682 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 ARL6IP4Q66PJ3 421 aaKnown RBP5.71□□□□□ -1.5
LINC00342-201ENST00000412393 ADALQ6DHV7 355 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 KIAA1841Q6NSI8 718 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 RINT1Q6NUQ1 792 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 FUT10Q6P4F1 479 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 TMCO3Q6UWJ1 677 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 C1orf186Q6ZWK4 172 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 RSRC2Q7L4I2 434 aaKnown RBP5.71□□□□□ -1.5
LINC00342-201ENST00000412393 TAS1R1Q7RTX1 841 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 BRAPQ7Z569 592 aa5.71□□□□□ -1.5
LINC00342-201ENST00000412393 APBB1IPQ7Z5R6 666 aaPredicted RBP5.71□□□□□ -1.5
LINC00342-201ENST00000412393 RNF168Q8IYW5 571 aaPredicted RBP5.71□□□□□ -1.5
LINC00342-201ENST00000412393 DAW1Q8N136 415 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms