RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 TMEM176AQ96HP8 235 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 MCEEQ96PE7 176 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 FAM193BQ96PV7 902 aaPredicted RBP13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 SLITRK1Q96PX8 696 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 MRPL9Q9BYD2 267 aaKnown RBP13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 PHACTR1Q9C0D0 580 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 NSRP1Q9H0G5 558 aaKnown RBP13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 TBC1D13Q9NVG8 400 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 CNTN3Q9P232 1028 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 NXF1Q9UBU9 619 aaKnown RBP13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 DCHS1Q96JQ0 3298 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 VPS13AQ96RL7 3174 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 FNDC1Q4ZHG4 1894 aaPredicted RBP13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 A0A087WUV0 522 aaPredicted RBP13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 TCRBV5S1A1TA0A578 114 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 TLDC2A0PJX2 215 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 E7EVH7 732 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 PTGESO14684 152 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 XPOTO43592 962 aaKnown RBP13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 TTC4O95801 387 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 SETSIPP0DME0 302 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 PSMA2P25787 234 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 PPM1AP35813 382 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 GABRB2P47870 512 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 ITGA8P53708 1063 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 TAS2R40P59535 323 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 PSMC1P62191 440 aaKnown RBP13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 GUCY1A3Q02108 690 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 TDGQ13569 410 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 XKR4Q5GH76 650 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 GLRA4Q5JXX5 417 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 PPP1R15BQ5SWA1 713 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 RHBDF2Q6PJF5 856 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 TMC5Q6UXY8 1006 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 YTHDF3Q7Z739 585 aaKnown RBP13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 CCDC25Q86WR0 208 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 LRRC43Q8N309 656 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 DCLK2Q8N568 766 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 RNF25Q96BH1 459 aaPredicted RBP13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 KIF12Q96FN5 646 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 CFAP57Q96MR6 1250 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 ZMAT2Q96NC0 199 aaKnown RBP13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 CCT8L2Q96SF2 557 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 SEMA4AQ9H3S1 761 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 CHST7Q9NS84 486 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 SLC12A6Q9UHW9 1150 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 ZNF148Q9UQR1 794 aa13.45□□□□□ -0.26
SMARCB1-203ENST00000407082 CITO14578 2027 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 FAM170AA1A519 330 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 NT5C1B-RDH14C9J2C7 533 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 TULP2O00295 520 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 TRAPPC3O43617 180 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 LIASO43766 372 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 CILPO75339 1184 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 CALCAP01258 141 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 ITGB3P05106 788 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 ITGAVP06756 1048 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 ABHD2P08910 425 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 KCNE1P15382 129 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 MAGEA9P43362 315 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 RAD23BP54727 409 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 CORO7P57737 925 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 GRIK3Q13003 919 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 MORF4L2Q15014 288 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 ZNF394Q53GI3 561 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 IZUMO3Q5VZ72 239 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 JADE1Q6IE81 842 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 SCARA5Q6ZMJ2 495 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 PHLDB2Q86SQ0 1253 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 ZNF280BQ86YH2 543 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 C1orf127Q8N9H9 656 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 ZNF473Q8WTR7 871 aaKnown RBP13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 AUTS2Q8WXX7 1259 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 ELMO3Q96BJ8 720 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 HPDLQ96IR7 371 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 PPP1R10Q96QC0 940 aaKnown RBP13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 HEMGNQ9BXL5 484 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 TRIM7Q9C029 511 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 SLC38A7Q9NVC3 462 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 DPP3Q9NY33 737 aa13.44□□□□□ -0.26
SMARCB1-203ENST00000407082 TRIP11Q15643 1979 aa13.43□□□□□ -0.26
SMARCB1-203ENST00000407082 hCG_1818297A0A087WSY0 165 aa13.43□□□□□ -0.26
SMARCB1-203ENST00000407082 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.43□□□□□ -0.26
SMARCB1-203ENST00000407082 MYO1CO00159 1063 aa13.43□□□□□ -0.26
SMARCB1-203ENST00000407082 DNALI1O14645 258 aaPredicted RBP13.43□□□□□ -0.26
SMARCB1-203ENST00000407082 DDHD2O94830 711 aa13.43□□□□□ -0.26
SMARCB1-203ENST00000407082 CFHP08603 1231 aa13.43□□□□□ -0.26
SMARCB1-203ENST00000407082 EPCAMP16422 314 aa13.43□□□□□ -0.26
SMARCB1-203ENST00000407082 PCK1P35558 622 aa13.43□□□□□ -0.26
SMARCB1-203ENST00000407082 GJC1P36383 396 aa13.43□□□□□ -0.26
SMARCB1-203ENST00000407082 MMP13P45452 471 aa13.43□□□□□ -0.26
SMARCB1-203ENST00000407082 ALDH7A1P49419 539 aaKnown RBP13.43□□□□□ -0.26
SMARCB1-203ENST00000407082 INCA1Q0VD86 236 aa13.43□□□□□ -0.26
SMARCB1-203ENST00000407082 SKIDA1Q1XH10 827 aa13.43□□□□□ -0.26
SMARCB1-203ENST00000407082 RSPO4Q2I0M5 234 aaPredicted RBP13.43□□□□□ -0.26
SMARCB1-203ENST00000407082 KIAA1841Q6NSI8 718 aa13.43□□□□□ -0.26
SMARCB1-203ENST00000407082 CPLX4Q7Z7G2 160 aa13.43□□□□□ -0.26
SMARCB1-203ENST00000407082 MAP7D3Q8IWC1 876 aa13.43□□□□□ -0.26
SMARCB1-203ENST00000407082 ZCCHC9Q8N567 271 aaKnown RBP13.43□□□□□ -0.26
SMARCB1-203ENST00000407082 ANKS4BQ8N8V4 417 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms