RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 FAM160A2Q8N612 972 aaPredicted RBP11.06□□□□□ -0.64
RPAIN-204ENST00000405578 SLC20A1Q8WUM9 679 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 IRGQQ8WZA9 623 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 DNASE1L2Q92874 299 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 MCRS1Q96EZ8 462 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.06□□□□□ -0.64
RPAIN-204ENST00000405578 SLC4A5Q9BY07 1137 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 NACA2Q9H009 215 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 LMAN1LQ9HAT1 526 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 ZNF334Q9HCZ1 680 aaPredicted RBP11.06□□□□□ -0.64
RPAIN-204ENST00000405578 RXFP3Q9NSD7 469 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 STRIP2Q9ULQ0 834 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 USP3Q9Y6I4 520 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 TSC2P49815 1807 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 AKAP13Q12802 2813 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 TRAV19A0A0A6YYK7 116 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 ZNF840PA6NDX5 716 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 TULP2O00295 520 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 MAN2B1O00754 1011 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 F11P03951 625 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 SKILP12757 684 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 CHRNB2P17787 502 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 AVPR1AP37288 418 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 CXCL12P48061 93 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 ADKP55263 362 aaKnown RBP11.05□□□□□ -0.64
RPAIN-204ENST00000405578 GSDMDP57764 484 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 FMO1Q01740 532 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 GRM2Q14416 872 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 ARID5BQ14865 1188 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 TEAD2Q15562 447 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 CLEC16AQ2KHT3 1053 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 HECTD3Q5T447 861 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 GPR158Q5T848 1215 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 HEATR6Q6AI08 1181 aaKnown RBP11.05□□□□□ -0.64
RPAIN-204ENST00000405578 TANGO2Q6ICL3 276 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 GAREM2Q75VX8 874 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 CEP68Q76N32 757 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 GPRIN1Q7Z2K8 1008 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 SCML4Q8N228 414 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 C12orf50Q8NA57 414 aaPredicted RBP11.05□□□□□ -0.64
RPAIN-204ENST00000405578 SHKBP1Q8TBC3 707 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 RNF139Q8WU17 664 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 FAM3CQ92520 227 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 C18orf8Q96DM3 657 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 CCDC42Q96M95 316 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 LRRC3Q9BY71 257 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 ULBP1Q9BZM6 244 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 TASP1Q9H6P5 420 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 BRD9Q9H8M2 597 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 TRPC7Q9HCX4 862 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 GMIPQ9P107 970 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 CHORDC1Q9UHD1 332 aaPredicted RBP11.05□□□□□ -0.64
RPAIN-204ENST00000405578 NAGPAQ9UK23 515 aa11.05□□□□□ -0.64
RPAIN-204ENST00000405578 GCN1Q92616 2671 aaKnown RBP11.04□□□□□ -0.64
RPAIN-204ENST00000405578 E5RJQ4 531 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 CAPN9O14815 690 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 NRDCO43847 1150 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 AKR1B10O60218 316 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 KCNK5O95279 499 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 CYP1A1P04798 512 aaPredicted RBP11.04□□□□□ -0.64
RPAIN-204ENST00000405578 CALB1P05937 261 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 CKMP06732 381 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 GZMAP12544 262 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 CEBPBP17676 345 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 CNR2P34972 360 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 CCR2P41597 374 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 RPL34P49207 117 aaKnown RBP11.04□□□□□ -0.64
RPAIN-204ENST00000405578 TUBP50607 506 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 DAOAP59103 153 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 YWHAGP61981 247 aaKnown RBP eCLIP11.04□□□□□ -0.64
RPAIN-204ENST00000405578 NOMO3P69849 1222 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 CDK17Q00537 523 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 GAS6Q14393 721 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 SLC5A9Q2M3M2 681 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 EFHC1Q5JVL4 640 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 PRSS36Q5K4E3 855 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 STPG1Q5TH74 334 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 SNX30Q5VWJ9 437 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 BTBD8Q5XKL5 378 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 PM20D1Q6GTS8 502 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 OR6B2Q6IFH4 312 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 PSAPL1Q6NUJ1 521 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 RSRC2Q7L4I2 434 aaKnown RBP11.04□□□□□ -0.64
RPAIN-204ENST00000405578 ZNF571Q7Z3V5 609 aaPredicted RBP11.04□□□□□ -0.64
RPAIN-204ENST00000405578 LONP2Q86WA8 852 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 SCUBE3Q8IX30 993 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 KDF1Q8NAX2 398 aaPredicted RBP11.04□□□□□ -0.64
RPAIN-204ENST00000405578 SPC24Q8NBT2 197 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 CPA5Q8WXQ8 436 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 ELSPBP1Q96BH3 223 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 FAM149B1Q96BN6 582 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 TCEAL4Q96EI5 215 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 TRIM11Q96F44 468 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 PANX2Q96RD6 677 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 IL21Q9HBE4 155 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 ABCC13Q9NSE7 274 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 OLA1Q9NTK5 396 aaKnown RBP11.04□□□□□ -0.64
RPAIN-204ENST00000405578 CLIC5Q9NZA1 410 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 ADAM22Q9P0K1 906 aa11.04□□□□□ -0.64
RPAIN-204ENST00000405578 WDR35Q9P2L0 1181 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms