RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 STMN3Q9NZ72 180 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 TMX2Q9Y320 296 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 STX7O15400 261 aaKnown RBP13.71□□□□□ -0.21
SNED1-205ENST00000405547 AP1G2O75843 785 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 PRIM2P49643 509 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 MYL6P60660 151 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 GIMAP4Q9NUV9 329 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 BARX2Q9UMQ3 279 aaPredicted RBP13.71□□□□□ -0.21
SNED1-205ENST00000405547 RARRES1P49788 294 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 ZNF484Q5JVG2 852 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 GLB1LQ6UWU2 654 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 OTOAQ7RTW8 1153 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 DNAAF5Q86Y56 855 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 MIEF2Q96C03 454 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 CINPQ9BW66 212 aaPredicted RBP13.71□□□□□ -0.21
SNED1-205ENST00000405547 VIL1P09327 827 aaKnown RBP13.71□□□□□ -0.21
SNED1-205ENST00000405547 CYP2C9P11712 490 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 MYL4P12829 197 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 UBE3AQ05086 875 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 VPS33AQ96AX1 596 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 CYP4F12Q9HCS2 524 aa13.71□□□□□ -0.21
SNED1-205ENST00000405547 RPL26L1Q9UNX3 145 aaKnown RBP13.71□□□□□ -0.21
SNED1-205ENST00000405547 KBTBD13C9JR72 458 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 MAPK1P28482 360 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 ATP6AP1LQ52LC2 224 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 ARMCX4Q5H9R4 360 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 SAMD4BQ5PRF9 694 aaKnown RBP13.71□□□□□ -0.22
SNED1-205ENST00000405547 TXNRD3Q86VQ6 643 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 KIAA1683Q9H0B3 1180 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 BLOC1S4Q9NUP1 217 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 POLG2Q9UHN1 485 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 ABHD2P08910 425 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 RPA3P35244 121 aaPredicted RBP13.71□□□□□ -0.22
SNED1-205ENST00000405547 CAP2P40123 477 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 CASP7P55210 303 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 RAB14P61106 215 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.71□□□□□ -0.22
SNED1-205ENST00000405547 TBCELQ5QJ74 424 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 NIPA1Q7RTP0 329 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 LUZP2Q86TE4 346 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 CHSY1Q86X52 802 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 GANQ9H2C0 597 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 SPASTQ9UBP0 616 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 SFMBT1Q9UHJ3 866 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 SPATA31A1Q5TZJ5 1347 aa13.71□□□□□ -0.22
SNED1-205ENST00000405547 KPNA4O00629 521 aaPredicted RBP13.7□□□□□ -0.22
SNED1-205ENST00000405547 TKTP29401 623 aaKnown RBP13.7□□□□□ -0.22
SNED1-205ENST00000405547 FAM98BQ52LJ0 330 aaKnown RBP13.7□□□□□ -0.22
SNED1-205ENST00000405547 SWT1Q5T5J6 900 aaKnown RBP13.7□□□□□ -0.22
SNED1-205ENST00000405547 GJD4Q96KN9 370 aaPredicted RBP13.7□□□□□ -0.22
SNED1-205ENST00000405547 KCTD14Q9BQ13 255 aaPredicted RBP13.7□□□□□ -0.22
SNED1-205ENST00000405547 USE1Q9NZ43 259 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 CSPG5O95196 566 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 NUDT18Q6ZVK8 323 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 NET1Q7Z628 596 aaPredicted RBP13.7□□□□□ -0.22
SNED1-205ENST00000405547 AGAP11Q8TF27 550 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 ATG4CQ96DT6 458 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 C9orf16Q9BUW7 83 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 GPAMQ9HCL2 828 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 ARMCX1Q9P291 453 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 ITGA11Q9UKX5 1188 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 APOC4-APOC2K7ER74 178 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 APOC2P02655 101 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 NCF4Q15080 339 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 PXMP2Q9NR77 195 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 ATF5Q9Y2D1 282 aaPredicted RBP13.7□□□□□ -0.22
SNED1-205ENST00000405547 CHRNA5P30532 468 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 SEZ6Q53EL9 994 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 EMC1Q8N766 993 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 MYOZ2Q9NPC6 264 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 CAB39Q9Y376 341 aaPredicted RBP13.7□□□□□ -0.22
SNED1-205ENST00000405547 A0A087WXM4 84 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 SLITRK3O94933 977 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 PSMG1O95456 288 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 C4BPBP20851 252 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 ATP6V1B2P21281 511 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 CHD4Q14839 1912 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 PDK4Q16654 411 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 MICALL2Q8IY33 904 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 SPIRE2Q8WWL2 714 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 DPYSL4O14531 572 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 CRTAMO95727 393 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 STAG3L1P0CL83 205 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 PPP1R10Q96QC0 940 aaKnown RBP13.7□□□□□ -0.22
SNED1-205ENST00000405547 ZBED2Q9BTP6 218 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 SPATA16Q9BXB7 569 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 KCNQ5Q9NR82 932 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 RRN3Q9NYV6 651 aa13.7□□□□□ -0.22
SNED1-205ENST00000405547 RAG1P15918 1043 aa13.69□□□□□ -0.22
SNED1-205ENST00000405547 TTKP33981 857 aa13.69□□□□□ -0.22
SNED1-205ENST00000405547 MIIPQ5JXC2 388 aa13.69□□□□□ -0.22
SNED1-205ENST00000405547 ZFYVE19Q96K21 471 aa13.69□□□□□ -0.22
SNED1-205ENST00000405547 TBC1D10AQ9BXI6 508 aa13.69□□□□□ -0.22
SNED1-205ENST00000405547 PDGFCQ9NRA1 345 aa13.69□□□□□ -0.22
SNED1-205ENST00000405547 CROTQ9UKG9 612 aa13.69□□□□□ -0.22
SNED1-205ENST00000405547 HACD1B0YJ81 288 aa13.69□□□□□ -0.22
SNED1-205ENST00000405547 MAP3K13O43283 966 aa13.69□□□□□ -0.22
SNED1-205ENST00000405547 DCXO43602 365 aa13.69□□□□□ -0.22
SNED1-205ENST00000405547 HMBSP08397 361 aa13.69□□□□□ -0.22
SNED1-205ENST00000405547 PGAM1P18669 254 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms