RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 SPATA31D3P0C874 917 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 SYN1P17600 705 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 ARSEP51690 589 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 GYS2P54840 703 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 GFPT1Q06210 699 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 SPATA31D4Q6ZUB0 917 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 GATAD2AQ86YP4 633 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 TRAPPC5Q8IUR0 188 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 FOXP3Q9BZS1 431 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 TBC1D3DA0A087WVF3 549 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 TBC1D3IA0A087WXS9 549 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 TBC1D3EA0A087X179 549 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 TBC1D3KA0A087X1G2 549 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 TBC1D3FA6NER0 549 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 TBC1D3LB9A6J9 549 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 TBC1D3HP0C7X1 549 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 CXCR2P25025 360 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 GRK4P32298 578 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 COX10Q12887 443 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 SLC39A12Q504Y0 691 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 TBC1D3GQ6DHY5 549 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 TBC1D3CQ6IPX1 549 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 RNF44Q7L0R7 432 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 TBC1D3Q8IZP1 549 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 CARD9Q9H257 536 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 C10orf88Q9H8K7 445 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 MCCC2Q9HCC0 563 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 RAB21Q9UL25 225 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 SMAPO00193 183 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 ATP1A3P13637 1013 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 PRKAR2AP13861 404 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 PEX6Q13608 980 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 STAT4Q14765 748 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 ARL6IP4Q66PJ3 421 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 LONP2Q86WA8 852 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 OSBPL9Q96SU4 736 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 ADAM2Q99965 735 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 PHACTR1Q9C0D0 580 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 PRKAB1Q9Y478 270 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 SH3D21A4FU49 640 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 H7C1W4 665 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 AP3D1O14617 1153 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 EIF3HO15372 352 aaKnown RBP eCLIP11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 CLK1P49759 484 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 BYSLQ13895 437 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 WWP1Q9H0M0 922 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 HDHD2Q9H0R4 259 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 ALG13Q9NP73 1137 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 SNTG2Q9NY99 539 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 CEP72Q9P209 647 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 SLC9A8Q9Y2E8 581 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 CAMSAP1Q5T5Y3 1602 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 A0A088AWK7 358 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 PIPSLA2A3N6 862 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 M0R3G1 203 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 APODP05090 189 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 ZNF10P21506 573 aaPredicted RBP11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 INAVAQ3KP66 663 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 ACOT1Q86TX2 421 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 LPCAT1Q8NF37 534 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 RERGQ96A58 199 aaPredicted RBP11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 MRPL1Q9BYD6 325 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 SPATC1LQ9H0A9 340 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 DDX43Q9NXZ2 648 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 HCN4Q9Y3Q4 1203 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 A0A1B0GTH6 734 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 CARNS1A5YM72 827 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 SRRM3A6NNA2 597 aaPredicted RBP11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 SCAMP3O14828 347 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 MAFKO60675 156 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 TBC1D10CQ8IV04 446 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 PPP1R13LQ8WUF5 828 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 CMTM5Q96DZ9 223 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 ADAM33Q9BZ11 813 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 PRKD2Q9BZL6 878 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 VPS9D1Q9Y2B5 631 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 CNPP09543 421 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 NOS3P29474 1203 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 SKIV2L2P42285 1042 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 CDH8P55286 799 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 LPIN1Q14693 890 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 LRRC14Q15048 493 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 BARGINQ6ZT62 677 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 CYB5R4Q7L1T6 521 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 GUF1Q8N442 669 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 KLHL23Q8NBE8 558 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 BBS4Q96RK4 519 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 HIPK3Q9H422 1215 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 SOAT2O75908 522 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 CDC27P30260 824 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 DSG3P32926 999 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 CAP2P40123 477 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 BOP1Q14137 746 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 SWT1Q5T5J6 900 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 CDH24Q86UP0 819 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 TMEM159Q96B96 161 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 MTMR4Q9NYA4 1195 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 CRYL1Q9Y2S2 319 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 OR10H2O60403 315 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms