RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 DNAJA1P31689 397 aaKnown RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CCNA1P78396 465 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 RASA2Q15283 850 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 OASLQ15646 514 aaKnown RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 ANKRD20A2Q5SQ80 823 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 PPP1R26Q5T8A7 1209 aaPredicted RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 ANKRD20A1Q5TYW2 823 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 RASIP1Q5U651 963 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 SNX30Q5VWJ9 437 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 RWDD4Q6NW29 188 aaKnown RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 C1orf94Q6P1W5 598 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 PACS1Q6VY07 963 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 PDZD4Q76G19 769 aaPredicted RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CCDC124Q96CT7 223 aaKnown RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 ZNF570Q96NI8 536 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 KCTD15Q96SI1 283 aaPredicted RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CAPN10Q9HC96 672 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 SSU72Q9NP77 194 aaKnown RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 SYBUQ9NX95 663 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 ZFATQ9P243 1243 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 DSEQ9UL01 958 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 UBQLN1Q9UMX0 589 aaKnown RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 VIRMAQ69YN4 1812 aaKnown RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 SMAPO00193 183 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 ZMPSTE24O75844 475 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 C22orf31O95567 290 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 FASTKD1Q53R41 847 aaKnown RBP5.09□□□□□ -1.59
SMAD4-202ENST00000398417 ALKBH8Q96BT7 664 aaKnown RBP5.09□□□□□ -1.59
SMAD4-202ENST00000398417 L3MBTL3Q96JM7 780 aaPredicted RBP5.09□□□□□ -1.59
SMAD4-202ENST00000398417 CLPTM1LQ96KA5 538 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 FZD8Q9H461 694 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 DLGAP2Q9P1A6 1054 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 ALS2Q96Q42 1657 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 C6orf222P0C671 652 aaPredicted RBP5.09□□□□□ -1.59
SMAD4-202ENST00000398417 SRGAP2BP0DMP2 458 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 SKIP12755 728 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 GNL1P36915 607 aaPredicted RBP5.09□□□□□ -1.59
SMAD4-202ENST00000398417 GMPRP36959 345 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 ZNF143P52747 638 aaPredicted RBP5.09□□□□□ -1.59
SMAD4-202ENST00000398417 KLF1Q13351 362 aaPredicted RBP5.09□□□□□ -1.59
SMAD4-202ENST00000398417 RCN1Q15293 331 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 NAT8LQ8N9F0 302 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 APPL2Q8NEU8 664 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 ZBED3Q96IU2 234 aaPredicted RBP5.09□□□□□ -1.59
SMAD4-202ENST00000398417 OSMRQ99650 979 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 SIK2Q9H0K1 926 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 CYP3A43Q9HB55 503 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 DONSONQ9NYP3 566 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 RBPJLQ9UBG7 517 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 SCOCQ9UIL1 159 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 SIX4Q9UIU6 781 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 PCDHGC3Q9UN70 934 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 PDE5AO76074 875 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 CYP2C9P11712 490 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 MX2P20592 715 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 VHLP40337 213 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 MBTD1Q05BQ5 628 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 PDK2Q15119 407 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 LBX2Q6XYB7 198 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 UBR7Q8N806 425 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 BANPQ8N9N5 519 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 INPP5DQ92835 1189 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 PDZD7Q9H5P4 517 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 STRCQ7RTU9 1775 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 TCRBV9S1A1TA0A576 114 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 GLRA3O75311 464 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 CYP2B6P20813 491 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 ATICP31939 592 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 GPD2P43304 727 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 USP10Q14694 798 aaKnown RBP5.09□□□□□ -1.59
SMAD4-202ENST00000398417 MAP1SQ66K74 1059 aaPredicted RBP5.09□□□□□ -1.59
SMAD4-202ENST00000398417 MTHFD1LQ6UB35 978 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 RYBPQ8N488 228 aaPredicted RBP5.09□□□□□ -1.59
SMAD4-202ENST00000398417 NLGN2Q8NFZ4 835 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 DENND1AQ8TEH3 1009 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 PTPRN2Q92932 1015 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 USP13Q92995 863 aaPredicted RBP5.09□□□□□ -1.59
SMAD4-202ENST00000398417 PEBP4Q96S96 227 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 DRC3Q9H069 523 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 PPCSQ9HAB8 311 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 GOLGA2P5Q9HBQ8 144 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 IL1RAPL1Q9NZN1 696 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 XPOTO43592 962 aaKnown RBP5.09□□□□□ -1.59
SMAD4-202ENST00000398417 PEX11AO75192 247 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 USP1O94782 785 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 ITGAVP06756 1048 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 KCNA3P22001 575 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 SLC7A14Q8TBB6 771 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 RNF31Q96EP0 1072 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 CCDC134Q9H6E4 229 aa5.09□□□□□ -1.59
SMAD4-202ENST00000398417 FBXO6Q9NRD1 293 aaPredicted RBP5.09□□□□□ -1.59
SMAD4-202ENST00000398417 BARX2Q9UMQ3 279 aaPredicted RBP5.09□□□□□ -1.59
SMAD4-202ENST00000398417 APOEP02649 317 aa5.09□□□□□ -1.6
SMAD4-202ENST00000398417 ACVR2BQ13705 512 aa5.09□□□□□ -1.6
SMAD4-202ENST00000398417 PRPSAP1Q14558 356 aa5.09□□□□□ -1.6
SMAD4-202ENST00000398417 GRIK4Q16099 956 aa5.09□□□□□ -1.6
SMAD4-202ENST00000398417 PDPK2PQ6A1A2 396 aa5.09□□□□□ -1.6
SMAD4-202ENST00000398417 DRICH1Q6PGQ1 229 aaPredicted RBP5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms