RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 ABCC13Q9NSE7 274 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 EHD2Q9NZN4 543 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 CALCOCO1Q9P1Z2 691 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 MAGED2Q9UNF1 606 aaPredicted RBP17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 PCDHA3Q9Y5H8 950 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 CCDC66A2RUB6 948 aa17.66■□□□□ 0.42
TSPAN4-205ENST00000397406 PRR33A8MZF0 331 aa17.66■□□□□ 0.42
TSPAN4-205ENST00000397406 CAPN9O14815 690 aa17.66■□□□□ 0.42
TSPAN4-205ENST00000397406 ENDOD1O94919 500 aa17.66■□□□□ 0.42
TSPAN4-205ENST00000397406 SP100P23497 879 aaPredicted RBP17.66■□□□□ 0.42
TSPAN4-205ENST00000397406 PCK1P35558 622 aa17.66■□□□□ 0.42
TSPAN4-205ENST00000397406 SULT1E1P49888 294 aa17.66■□□□□ 0.42
TSPAN4-205ENST00000397406 HDAC4P56524 1084 aa17.66■□□□□ 0.42
TSPAN4-205ENST00000397406 SLC25A11Q02978 314 aaKnown RBP17.66■□□□□ 0.42
TSPAN4-205ENST00000397406 BTBD8Q5XKL5 378 aa17.66■□□□□ 0.42
TSPAN4-205ENST00000397406 RTL10Q7L3V2 364 aa17.66■□□□□ 0.42
TSPAN4-205ENST00000397406 STRADAQ7RTN6 431 aa17.66■□□□□ 0.42
TSPAN4-205ENST00000397406 ALG3Q92685 438 aa17.66■□□□□ 0.42
TSPAN4-205ENST00000397406 PSMG2Q969U7 264 aa17.66■□□□□ 0.42
TSPAN4-205ENST00000397406 OSBPL9Q96SU4 736 aa17.66■□□□□ 0.42
TSPAN4-205ENST00000397406 TLR8Q9NR97 1041 aaKnown RBP17.66■□□□□ 0.42
TSPAN4-205ENST00000397406 RRN3Q9NYV6 651 aa17.66■□□□□ 0.42
TSPAN4-205ENST00000397406 STAP1Q9ULZ2 295 aa17.66■□□□□ 0.42
TSPAN4-205ENST00000397406 SAR1BQ9Y6B6 198 aa17.66■□□□□ 0.42
TSPAN4-205ENST00000397406 PSTPIP1O43586 416 aa17.65■□□□□ 0.42
TSPAN4-205ENST00000397406 URI1O94763 535 aaPredicted RBP17.65■□□□□ 0.42
TSPAN4-205ENST00000397406 MIPP30301 263 aa17.65■□□□□ 0.42
TSPAN4-205ENST00000397406 DNA2P51530 1060 aa17.65■□□□□ 0.42
TSPAN4-205ENST00000397406 RARS2Q5T160 578 aaKnown RBP17.65■□□□□ 0.42
TSPAN4-205ENST00000397406 LRRC38Q5VT99 294 aa17.65■□□□□ 0.42
TSPAN4-205ENST00000397406 TXNRD3NBQ6F5E7 133 aa17.65■□□□□ 0.42
TSPAN4-205ENST00000397406 CYP4V2Q6ZWL3 525 aaPredicted RBP17.65■□□□□ 0.42
TSPAN4-205ENST00000397406 DNAJB7Q7Z6W7 309 aaPredicted RBP17.65■□□□□ 0.42
TSPAN4-205ENST00000397406 RHOT1Q8IXI2 618 aa17.65■□□□□ 0.42
TSPAN4-205ENST00000397406 OVCA2Q8WZ82 227 aa17.65■□□□□ 0.42
TSPAN4-205ENST00000397406 PGAP3Q96FM1 320 aaPredicted RBP17.65■□□□□ 0.42
TSPAN4-205ENST00000397406 SLITRK1Q96PX8 696 aa17.65■□□□□ 0.42
TSPAN4-205ENST00000397406 PSMB7Q99436 277 aa17.65■□□□□ 0.42
TSPAN4-205ENST00000397406 NCAPGQ9BPX3 1015 aa17.65■□□□□ 0.42
TSPAN4-205ENST00000397406 PLEKHA4Q9H4M7 779 aa17.65■□□□□ 0.42
TSPAN4-205ENST00000397406 MAN1C1Q9NR34 630 aa17.65■□□□□ 0.42
TSPAN4-205ENST00000397406 CLIC5Q9NZA1 410 aa17.65■□□□□ 0.42
TSPAN4-205ENST00000397406 ASB3Q9Y575 518 aa17.65■□□□□ 0.42
TSPAN4-205ENST00000397406 M0QYT0 321 aa17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 SRGAP2O75044 1071 aa17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 IGLV3-25P01717 112 aa17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 LRG1P02750 347 aa17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 DESP17661 470 aa17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 TCP1P17987 556 aaKnown RBP17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 IL1R2P27930 398 aa17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 CXCR5P32302 372 aa17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 SSR1P43307 286 aaKnown RBP17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 PSEN1P49768 467 aa17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 ATXN1P54253 815 aaKnown RBP17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 DCAF12L1Q5VU92 463 aa17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 SNX30Q5VWJ9 437 aa17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 MSANTD2Q6P1R3 559 aa17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 POLNQ7Z5Q5 900 aa17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 ITIH5Q86UX2 942 aa17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 UBL4BQ8N7F7 174 aa17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 PDZD8Q8NEN9 1154 aa17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 DQX1Q8TE96 717 aaKnown RBP17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 HDAC7Q8WUI4 952 aa17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 EDAQ92838 391 aa17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 DOCK6Q96HP0 2047 aa17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 PEBP4Q96S96 227 aa17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.64■□□□□ 0.42
TSPAN4-205ENST00000397406 TECTAO75443 2155 aa17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 C2CD4DB7Z1M9 353 aa17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 CES2O00748 559 aa17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 KCNK3O14649 394 aa17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 TADA3O75528 432 aa17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 ZMYND10O75800 440 aa17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 TRUB2O95900 331 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 EIF4EBP2Q13542 120 aaPredicted RBP17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 HADHQ16836 314 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 PPM1LQ5SGD2 360 aa17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 TAC4Q86UU9 113 aa17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 COG1Q8WTW3 980 aa17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 LRRC3Q9BY71 257 aa17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 SMOC2Q9H3U7 446 aa17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 ZNF334Q9HCZ1 680 aaPredicted RBP17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 UXTQ9UBK9 157 aaPredicted RBP17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 PCSK1NQ9UHG2 260 aa17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 USP18Q9UMW8 372 aa17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 MRFAP1Q9Y605 127 aa17.64■□□□□ 0.41
TSPAN4-205ENST00000397406 NOTCH4Q99466 2003 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 ZNF185O15231 689 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 SRGAP2BP0DMP2 458 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 RARGP13631 454 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 HOXA9P31269 272 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 RDXP35241 583 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 RWDD2BP57060 319 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 ZXDAP98168 799 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 DEUP1Q05D60 604 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 ITIH3Q06033 890 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 TAF12Q16514 161 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 ATP13A4Q4VNC1 1196 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 TMC5Q6UXY8 1006 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms