RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 LRG1P02750 347 aa15.55■□□□□ 0.08
CAPN3-207ENST00000397200 EPHB3P54753 998 aa15.55■□□□□ 0.08
CAPN3-207ENST00000397200 TAS2R40P59535 323 aa15.55■□□□□ 0.08
CAPN3-207ENST00000397200 IFRD2Q12894 506 aaPredicted RBP15.55■□□□□ 0.08
CAPN3-207ENST00000397200 KLF1Q13351 362 aaPredicted RBP15.55■□□□□ 0.08
CAPN3-207ENST00000397200 MTMR3Q13615 1198 aa15.55■□□□□ 0.08
CAPN3-207ENST00000397200 PPM1LQ5SGD2 360 aa15.55■□□□□ 0.08
CAPN3-207ENST00000397200 OR6B2Q6IFH4 312 aa15.55■□□□□ 0.08
CAPN3-207ENST00000397200 ZDHHC24Q6UX98 284 aa15.55■□□□□ 0.08
CAPN3-207ENST00000397200 RTL10Q7L3V2 364 aa15.55■□□□□ 0.08
CAPN3-207ENST00000397200 TMC3Q7Z5M5 1100 aa15.55■□□□□ 0.08
CAPN3-207ENST00000397200 STKLD1Q8NE28 680 aa15.55■□□□□ 0.08
CAPN3-207ENST00000397200 EXD1Q8NHP7 514 aa15.55■□□□□ 0.08
CAPN3-207ENST00000397200 FAM161BQ96MY7 647 aa15.55■□□□□ 0.08
CAPN3-207ENST00000397200 IGFLR1Q9H665 355 aa15.55■□□□□ 0.08
CAPN3-207ENST00000397200 GRHL1Q9NZI5 618 aa15.55■□□□□ 0.08
CAPN3-207ENST00000397200 WDR35Q9P2L0 1181 aa15.55■□□□□ 0.08
CAPN3-207ENST00000397200 ZNF638Q14966 1978 aaKnown RBP15.55■□□□□ 0.08
CAPN3-207ENST00000397200 SLC38A8A6NNN8 435 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 PPFIA2O75334 1257 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 HSD17B3P37058 310 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 ZNF268Q14587 947 aaPredicted RBP15.54■□□□□ 0.08
CAPN3-207ENST00000397200 TAF12Q16514 161 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 TCEAL5Q5H9L2 206 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 LRRC38Q5VT99 294 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 DNAJC24Q6P3W2 148 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 FAM183BPQ6ZVS7 135 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 PHLDB2Q86SQ0 1253 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 ITIH5Q86UX2 942 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 XYLT1Q86Y38 959 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 ZDHHC17Q8IUH5 632 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 SCUBE3Q8IX30 993 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 SCAMP5Q8TAC9 235 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 PKNOX2Q96KN3 472 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 RUFY1Q96T51 708 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 HERPUD2Q9BSE4 406 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 ULBP1Q9BZM6 244 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 FBXO44Q9H4M3 255 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 CNGB3Q9NQW8 809 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 COMMD8Q9NX08 183 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 NFS1Q9Y697 457 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 GOLGA8SH3BPF8 625 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 PAPSS1O43252 624 aaPredicted RBP15.54■□□□□ 0.08
CAPN3-207ENST00000397200 ZBED1O96006 694 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 CSH1P0DML2 217 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 CSH2P0DML3 217 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 RPL7AP62424 266 aaKnown RBP15.54■□□□□ 0.08
CAPN3-207ENST00000397200 ELMOD1Q8N336 334 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 GOLGA6L1Q8N7Z2 621 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 FNIP1Q8TF40 1166 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 GAS2L1Q99501 681 aaPredicted RBP15.54■□□□□ 0.08
CAPN3-207ENST00000397200 FMO2Q99518 471 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 DPH5Q9H2P9 285 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 MAGED2Q9UNF1 606 aaPredicted RBP15.54■□□□□ 0.08
CAPN3-207ENST00000397200 ASB3Q9Y575 518 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 USP3Q9Y6I4 520 aa15.54■□□□□ 0.08
CAPN3-207ENST00000397200 CDH23Q9H251 3354 aa15.53■□□□□ 0.08
CAPN3-207ENST00000397200 USP17L7P0C7H9 530 aa15.53■□□□□ 0.08
CAPN3-207ENST00000397200 IGFBP4P22692 258 aa15.53■□□□□ 0.08
CAPN3-207ENST00000397200 YWHAQP27348 245 aa15.53■□□□□ 0.08
CAPN3-207ENST00000397200 PTPN7P35236 360 aa15.53■□□□□ 0.08
CAPN3-207ENST00000397200 FLT3P36888 993 aa15.53■□□□□ 0.08
CAPN3-207ENST00000397200 USP46P62068 366 aa15.53■□□□□ 0.08
CAPN3-207ENST00000397200 MRPS5P82675 430 aaKnown RBP15.53■□□□□ 0.08
CAPN3-207ENST00000397200 SLC6A3Q01959 620 aa15.53■□□□□ 0.08
CAPN3-207ENST00000397200 HYAL1Q12794 435 aa15.53■□□□□ 0.08
CAPN3-207ENST00000397200 TTMPQ5BVD1 217 aa15.53■□□□□ 0.08
CAPN3-207ENST00000397200 FAM102AQ5T9C2 384 aaPredicted RBP15.53■□□□□ 0.08
CAPN3-207ENST00000397200 SYDE1Q6ZW31 735 aaPredicted RBP15.53■□□□□ 0.08
CAPN3-207ENST00000397200 SCML4Q8N228 414 aa15.53■□□□□ 0.08
CAPN3-207ENST00000397200 CLEC4CQ8WTT0 213 aa15.53■□□□□ 0.08
CAPN3-207ENST00000397200 CASP10Q92851 521 aa15.53■□□□□ 0.08
CAPN3-207ENST00000397200 MCRS1Q96EZ8 462 aa15.53■□□□□ 0.08
CAPN3-207ENST00000397200 MTCH2Q9Y6C9 303 aa15.53■□□□□ 0.08
CAPN3-207ENST00000397200 GOLGA6CA6NDK9 693 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 GJB6O95452 261 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 HNRNPA1P09651 372 aaKnown RBP eCLIP15.52■□□□□ 0.08
CAPN3-207ENST00000397200 GOLGA6DP0CG33 693 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 SRGAP2BP0DMP2 458 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 POU3F3P20264 500 aaPredicted RBP15.52■□□□□ 0.08
CAPN3-207ENST00000397200 HOXA9P31269 272 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 RPL21P46778 160 aaKnown RBP15.52■□□□□ 0.08
CAPN3-207ENST00000397200 DAOAP59103 153 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 OGDHQ02218 1023 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 ADGRE1Q14246 886 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 PIGHQ14442 188 aaPredicted RBP15.52■□□□□ 0.08
CAPN3-207ENST00000397200 HABP4Q5JVS0 413 aaKnown RBP15.52■□□□□ 0.08
CAPN3-207ENST00000397200 EMC10Q5UCC4 262 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 PM20D1Q6GTS8 502 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 GPR153Q6NV75 609 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 OLFML1Q6UWY5 402 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 EFHBQ8N7U6 833 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 IRGQQ8WZA9 623 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 FBXO32Q969P5 355 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 PSMG2Q969U7 264 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 ARL8AQ96BM9 186 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 ZNF512Q96ME7 567 aaPredicted RBP15.52■□□□□ 0.08
CAPN3-207ENST00000397200 MCEEQ96PE7 176 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 TTLL2Q9BWV7 592 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 DCLK3Q9C098 648 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms