RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 GRIA2P42262 883 aa14.42□□□□□ -0.1
SEC13-205ENST00000397101 KLK7P49862 253 aa14.42□□□□□ -0.1
SEC13-205ENST00000397101 PREPLQ4J6C6 727 aaPredicted RBP14.42□□□□□ -0.1
SEC13-205ENST00000397101 DPH6Q7L8W6 267 aa14.42□□□□□ -0.1
SEC13-205ENST00000397101 VSTM4Q8IW00 320 aa14.42□□□□□ -0.1
SEC13-205ENST00000397101 C1orf127Q8N9H9 656 aa14.42□□□□□ -0.1
SEC13-205ENST00000397101 CXorf38Q8TB03 319 aa14.42□□□□□ -0.1
SEC13-205ENST00000397101 CPLX3Q8WVH0 158 aa14.42□□□□□ -0.1
SEC13-205ENST00000397101 ADAMTS14Q8WXS8 1223 aa14.42□□□□□ -0.1
SEC13-205ENST00000397101 ERGIC2Q96RQ1 377 aa14.42□□□□□ -0.1
SEC13-205ENST00000397101 TTLL2Q9BWV7 592 aa14.42□□□□□ -0.1
SEC13-205ENST00000397101 FAM207AQ9NSI2 230 aaPredicted RBP14.42□□□□□ -0.1
SEC13-205ENST00000397101 TRPM5Q9NZQ8 1165 aa14.42□□□□□ -0.1
SEC13-205ENST00000397101 ANAPC1Q9H1A4 1944 aa14.42□□□□□ -0.1
SEC13-205ENST00000397101 ANTXRLA6NF34 631 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 PMM2O15305 246 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 ADAM23O75077 832 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 KLF8O95600 359 aaPredicted RBP14.41□□□□□ -0.1
SEC13-205ENST00000397101 CST3P01034 146 aaPredicted RBP14.41□□□□□ -0.1
SEC13-205ENST00000397101 SYPP08247 313 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 CD59P13987 128 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 PON1P27169 355 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 TIE1P35590 1138 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 MCCD1P59942 119 aaPredicted RBP14.41□□□□□ -0.1
SEC13-205ENST00000397101 MYL6P60660 151 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 KCNMA1Q12791 1236 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 MYO1EQ12965 1108 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 MAPRE1Q15691 268 aaKnown RBP14.41□□□□□ -0.1
SEC13-205ENST00000397101 SGSM1Q2NKQ1 1148 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 ZNF699Q32M78 642 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 SOWAHCQ53LP3 525 aaPredicted RBP14.41□□□□□ -0.1
SEC13-205ENST00000397101 SPECC1LQ69YQ0 1117 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 DENND5BQ6ZUT9 1274 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 ARMCX6Q7L4S7 300 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 TRMT11Q7Z4G4 463 aaKnown RBP14.41□□□□□ -0.1
SEC13-205ENST00000397101 LIMS2Q7Z4I7 341 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 DDX42Q86XP3 938 aaKnown RBP eCLIP14.41□□□□□ -0.1
SEC13-205ENST00000397101 CHCHD4Q8N4Q1 142 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 SEMA4DQ92854 862 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 NT5C1BQ96P26 610 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 NUP58Q9BVL2 599 aa14.41□□□□□ -0.1
SEC13-205ENST00000397101 BCCIPQ9P287 314 aaKnown RBP eCLIP14.41□□□□□ -0.1
SEC13-205ENST00000397101 ZNF840PA6NDX5 716 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 ARHGAP33O14559 1287 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 VNN1O95497 513 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 ADH1CP00326 375 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 CFIP05156 583 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 PTMAP06454 111 aaKnown RBP14.4□□□□□ -0.1
SEC13-205ENST00000397101 ACAT1P24752 427 aaKnown RBP14.4□□□□□ -0.1
SEC13-205ENST00000397101 CDC25BP30305 580 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 FAM193AP78312 1265 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 NOP14P78316 857 aaKnown RBP14.4□□□□□ -0.1
SEC13-205ENST00000397101 SCAPQ12770 1279 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 TRIM65Q6PJ69 517 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 RHBDF2Q6PJF5 856 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 PDZD3Q86UT5 571 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 OSTM1Q86WC4 334 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 TTC30AQ86WT1 665 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 SCN4BQ8IWT1 228 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 ADGRF2Q8IZF7 708 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 PHTF2Q8N3S3 785 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 MINDY1Q8N5J2 469 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 FRMD1Q8N878 549 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 TTC16Q8NEE8 873 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 ELMO3Q96BJ8 720 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 OTUB2Q96DC9 234 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 HPDLQ96IR7 371 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 ARHGEF4Q9NR80 690 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 TBC1D14Q9P2M4 693 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 NXF1Q9UBU9 619 aaKnown RBP14.4□□□□□ -0.1
SEC13-205ENST00000397101 CDH9Q9ULB4 789 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 COQ4Q9Y3A0 265 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 ADAMTS20P59510 1910 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 PCDH15Q96QU1 1955 aa14.4□□□□□ -0.1
SEC13-205ENST00000397101 GON4LQ3T8J9 2241 aa14.39□□□□□ -0.11
SEC13-205ENST00000397101 HELZP42694 1942 aaKnown RBP14.39□□□□□ -0.11
SEC13-205ENST00000397101 TCRBV21S2A2A0A5A6 115 aa14.39□□□□□ -0.11
SEC13-205ENST00000397101 TRIM66O15016 1216 aa14.39□□□□□ -0.11
SEC13-205ENST00000397101 ZNF217O75362 1048 aa14.39□□□□□ -0.11
SEC13-205ENST00000397101 GJB3O75712 270 aa14.39□□□□□ -0.11
SEC13-205ENST00000397101 OAS1P00973 400 aaKnown RBP14.39□□□□□ -0.11
SEC13-205ENST00000397101 P4HA1P13674 534 aa14.39□□□□□ -0.11
SEC13-205ENST00000397101 ATICP31939 592 aa14.39□□□□□ -0.11
SEC13-205ENST00000397101 SLC6A11P48066 632 aa14.39□□□□□ -0.11
SEC13-205ENST00000397101 POLR2FP61218 127 aaKnown RBP14.39□□□□□ -0.11
SEC13-205ENST00000397101 TNNC1P63316 161 aa14.39□□□□□ -0.11
SEC13-205ENST00000397101 RPL6Q02878 288 aaKnown RBP14.39□□□□□ -0.11
SEC13-205ENST00000397101 ZNF33AQ06730 810 aa14.39□□□□□ -0.11
SEC13-205ENST00000397101 RAPGEF1Q13905 1077 aa14.39□□□□□ -0.11
SEC13-205ENST00000397101 TRIM14Q14142 442 aa14.39□□□□□ -0.11
SEC13-205ENST00000397101 TRIP6Q15654 476 aaKnown RBP14.39□□□□□ -0.11
SEC13-205ENST00000397101 ZNF667Q5HYK9 610 aa14.39□□□□□ -0.11
SEC13-205ENST00000397101 KLHDC7AQ5VTJ3 777 aa14.39□□□□□ -0.11
SEC13-205ENST00000397101 SPOPLQ6IQ16 392 aa14.39□□□□□ -0.11
SEC13-205ENST00000397101 CCNI2Q6ZMN8 369 aaPredicted RBP14.39□□□□□ -0.11
SEC13-205ENST00000397101 PPM1KQ8N3J5 372 aa14.39□□□□□ -0.11
SEC13-205ENST00000397101 ZNF397Q8NF99 534 aaPredicted RBP14.39□□□□□ -0.11
SEC13-205ENST00000397101 HMGB4Q8WW32 186 aa14.39□□□□□ -0.11
SEC13-205ENST00000397101 TAF4BQ92750 862 aa14.39□□□□□ -0.11
SEC13-205ENST00000397101 GTPBP2Q9BX10 602 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms