RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 MMP17Q9ULZ9 603 aa14.59□□□□□ -0.07
SEC13-204ENST00000397099 STARD13Q9Y3M8 1113 aa14.59□□□□□ -0.07
SEC13-204ENST00000397099 SPAG17Q6Q759 2223 aa14.59□□□□□ -0.07
SEC13-204ENST00000397099 DCHS1Q96JQ0 3298 aa14.59□□□□□ -0.07
SEC13-204ENST00000397099 RETP07949 1114 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 BRD2P25440 801 aaKnown RBP14.58□□□□□ -0.08
SEC13-204ENST00000397099 PON1P27169 355 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 CORO1AP31146 461 aaKnown RBP14.58□□□□□ -0.08
SEC13-204ENST00000397099 HOXC13P31276 330 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 PTK2Q05397 1052 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 TRIP4Q15650 581 aaPredicted RBP14.58□□□□□ -0.08
SEC13-204ENST00000397099 C2orf27AQ580R0 203 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 GRAMD4Q6IC98 578 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 PMF1Q6P1K2 205 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 MSANTD2Q6P1R3 559 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 SASS6Q6UVJ0 657 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 UNC45BQ8IWX7 931 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 ZNF557Q8N988 423 aaPredicted RBP14.58□□□□□ -0.08
SEC13-204ENST00000397099 TSTD1Q8NFU3 115 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 GAB3Q8WWW8 586 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 ZNF606Q8WXB4 792 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 SHC3Q92529 594 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 EZH1Q92800 747 aaPredicted RBP14.58□□□□□ -0.08
SEC13-204ENST00000397099 NOX5Q96PH1 765 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 CRACR2AQ9BSW2 395 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 SLC2A11Q9BYW1 496 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 POLMQ9NP87 494 aaPredicted RBP14.58□□□□□ -0.08
SEC13-204ENST00000397099 PARD6AQ9NPB6 346 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 DNAJC17Q9NVM6 304 aaKnown RBP14.58□□□□□ -0.08
SEC13-204ENST00000397099 ANO10Q9NW15 660 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 DAAM1Q9Y4D1 1078 aa14.58□□□□□ -0.08
SEC13-204ENST00000397099 SLC12A8A0AV02 714 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 YJEFN3A6XGL0 299 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 PRR5-ARHGAP8B1AHC4 643 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 E7ENQ6 273 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 NEDD8-MDP1E9PL57 170 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 TULP2O00295 520 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 SCAMP3O14828 347 aaKnown RBP14.57□□□□□ -0.08
SEC13-204ENST00000397099 AXIN1O15169 862 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 ZBTB24O43167 697 aaPredicted RBP14.57□□□□□ -0.08
SEC13-204ENST00000397099 THAP12O43422 761 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 RPP40O75818 363 aaKnown RBP14.57□□□□□ -0.08
SEC13-204ENST00000397099 LETM1O95202 739 aaPredicted RBP14.57□□□□□ -0.08
SEC13-204ENST00000397099 LTFP02788 710 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 LCP1P13796 627 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 SLC9A1P19634 815 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 GPD2P43304 727 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 SLC6A11P48066 632 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 ARHGAP8P85298 464 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 RING1Q06587 406 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 NNTQ13423 1086 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 BYSLQ13895 437 aaKnown RBP14.57□□□□□ -0.08
SEC13-204ENST00000397099 NUGGCQ68CJ6 796 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 SDE2Q6IQ49 451 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 BHLHA9Q7RTU4 235 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 CACNA2D4Q7Z3S7 1137 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 FMNL3Q8IVF7 1028 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 PHTF2Q8N3S3 785 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 ANKRD20A12PQ8NF67 263 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 AZIN2Q96A70 460 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 HHIPQ96QV1 700 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 POLR3BQ9NW08 1133 aaPredicted RBP14.57□□□□□ -0.08
SEC13-204ENST00000397099 TMEM51Q9NW97 253 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 FBXO10Q9UK96 956 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 NUDT5Q9UKK9 219 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 AGO1Q9UL18 857 aaKnown RBP14.57□□□□□ -0.08
SEC13-204ENST00000397099 SLC27A6Q9Y2P4 619 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 LAMA1P25391 3075 aa14.57□□□□□ -0.08
SEC13-204ENST00000397099 GPR179Q6PRD1 2367 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 MYO18AQ92614 2054 aaKnown RBP14.56□□□□□ -0.08
SEC13-204ENST00000397099 KCNJ18B7U540 433 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 MDM4O15151 490 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 IRAK2O43187 625 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 PENKP01210 267 aaPredicted RBP14.56□□□□□ -0.08
SEC13-204ENST00000397099 KIR2DL1P43626 348 aaPredicted RBP14.56□□□□□ -0.08
SEC13-204ENST00000397099 DGKGP49619 791 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 SEC13P55735 322 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 MTA1Q13330 715 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 KCNJ12Q14500 433 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 CRY1Q16526 586 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 MPPE1Q53F39 396 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 USP39Q53GS9 565 aaKnown RBP14.56□□□□□ -0.08
SEC13-204ENST00000397099 TCP11X2Q5H9J9 407 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 TPGS1Q6ZTW0 290 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 TMEM110Q86TL2 294 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 C12orf40Q86WS4 652 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 FAM217AQ8IXS0 508 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 FAM160A2Q8N612 972 aaPredicted RBP14.56□□□□□ -0.08
SEC13-204ENST00000397099 NAT16Q8N8M0 369 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 IL17RCQ8NAC3 791 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 WBP2Q969T9 261 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 ZC3H10Q96K80 434 aaKnown RBP14.56□□□□□ -0.08
SEC13-204ENST00000397099 DDX50Q9BQ39 737 aaKnown RBP14.56□□□□□ -0.08
SEC13-204ENST00000397099 ZSWIM1Q9BR11 485 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 LHX5Q9H2C1 402 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 ST7Q9NRC1 585 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 DLL3Q9NYJ7 618 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 STOML2Q9UJZ1 356 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 PCDHGC3Q9UN70 934 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 NFE2L3Q9Y4A8 694 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms