RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 RPP25Q9BUL9 199 aaKnown RBP11.07□□□□□ -0.64
NUP98-205ENST00000397007 PIGVQ9NUD9 493 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 SCN8AQ9UQD0 1980 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 OTOL1A6NHN0 477 aaPredicted RBP11.07□□□□□ -0.64
NUP98-205ENST00000397007 PENKP01210 267 aaPredicted RBP11.07□□□□□ -0.64
NUP98-205ENST00000397007 LCP1P13796 627 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 ACAP1Q15027 740 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 C2CD6Q53TS8 623 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 HECTD3Q5T447 861 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 TOGARAM2Q6ZUX3 1019 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 ETFBKMTQ8IXQ9 262 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 ZSCAN18Q8TBC5 510 aaPredicted RBP11.07□□□□□ -0.64
NUP98-205ENST00000397007 CPLX3Q8WVH0 158 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 TRIM11Q96F44 468 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 PEBP4Q96S96 227 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 CYP2S1Q96SQ9 504 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 SPTLC3Q9NUV7 552 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 E2F8A0AVK6 867 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 TLR5O60602 858 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 TBX18O95935 607 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 CES5AQ6NT32 575 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 ELMOD1Q8N336 334 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 C1orf74Q96LT6 269 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 SLITRK1Q96PX8 696 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 BAG1Q99933 345 aaPredicted RBP11.07□□□□□ -0.64
NUP98-205ENST00000397007 TRIM62Q9BVG3 475 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 KLC2Q9H0B6 622 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 TRPM5Q9NZQ8 1165 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 NR2E1Q9Y466 385 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 EPN1Q9Y6I3 576 aaPredicted RBP11.07□□□□□ -0.64
NUP98-205ENST00000397007 SH3PXD2AQ5TCZ1 1133 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 DEFB106AQ8N104 65 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 FAF2Q96CS3 445 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 CALR3Q96L12 384 aaKnown RBP11.06□□□□□ -0.64
NUP98-205ENST00000397007 LACRTQ9GZZ8 138 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 CD248Q9HCU0 757 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 PARVAQ9NVD7 372 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 ADAM22Q9P0K1 906 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 UVRAGQ9P2Y5 699 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 CHORDC1Q9UHD1 332 aaPredicted RBP11.06□□□□□ -0.64
NUP98-205ENST00000397007 ZNF487B1APH4 448 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 LEFTY2O00292 366 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 GJB6O95452 261 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 TNFAIP3P21580 790 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 GPR158Q5T848 1215 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 AFMIDQ63HM1 303 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 OTOP3Q7RTS5 596 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 VSIG1Q86XK7 387 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 CELF5Q8N6W0 485 aaKnown RBP11.06□□□□□ -0.64
NUP98-205ENST00000397007 PRICKLE1Q96MT3 831 aaPredicted RBP11.06□□□□□ -0.64
NUP98-205ENST00000397007 C11orf70Q9BRQ4 267 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 MIS12Q9H081 205 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 METTL5Q9NRN9 209 aaKnown RBP11.06□□□□□ -0.64
NUP98-205ENST00000397007 IGSF9Q9P2J2 1179 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 DUSP12Q9UNI6 340 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 PCDHA13Q9Y5I0 950 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 DRGXA6NNA5 263 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 CCP110O43303 1012 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 PCK1P35558 622 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 USP8P40818 1118 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 NSFP46459 744 aaKnown RBP11.06□□□□□ -0.64
NUP98-205ENST00000397007 AIF1P55008 147 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 GPIHBP1Q8IV16 184 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 ARID3BQ8IVW6 561 aaPredicted RBP11.06□□□□□ -0.64
NUP98-205ENST00000397007 REXO1L1PQ8IX06 675 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 CCDC112Q8NEF3 446 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 OSCP1Q8WVF1 389 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 TDP1Q9NUW8 608 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 DNMT3LQ9UJW3 386 aa11.06□□□□□ -0.64
NUP98-205ENST00000397007 CXorf51AA0A1B0GTR3 108 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 HOXC11O43248 304 aaPredicted RBP11.05□□□□□ -0.64
NUP98-205ENST00000397007 CSPG5O95196 566 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 GPC5P78333 572 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 ARID5AQ03989 594 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 FYB2Q5VWT5 728 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 SLC44A3Q8N4M1 653 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.05□□□□□ -0.64
NUP98-205ENST00000397007 ARL14EPQ8N8R7 260 aaPredicted RBP11.05□□□□□ -0.64
NUP98-205ENST00000397007 PCMTD1Q96MG8 357 aaPredicted RBP11.05□□□□□ -0.64
NUP98-205ENST00000397007 TBCBQ99426 244 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 HCN2Q9UL51 889 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 NUMBLQ9Y6R0 609 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 MYO10Q9HD67 2058 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 ANKRD36A6QL64 1941 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 TRAV19A0A0A6YYK7 116 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 CHADO15335 359 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 ARHGAP6O43182 974 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 LRCH4O75427 683 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 SLC6A4P31645 630 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 VASPP50552 380 aaPredicted RBP11.05□□□□□ -0.64
NUP98-205ENST00000397007 VAV2P52735 878 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 PIK3R6Q5UE93 754 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 C11orf63Q6NUN7 778 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 PSTKQ8IV42 348 aaKnown RBP11.05□□□□□ -0.64
NUP98-205ENST00000397007 DEPDC1BQ8WUY9 529 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 EZH1Q92800 747 aaPredicted RBP11.05□□□□□ -0.64
NUP98-205ENST00000397007 DNASE1L2Q92874 299 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 RETREG1Q9H6L5 497 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 KCNK12Q9HB15 430 aa11.05□□□□□ -0.64
NUP98-205ENST00000397007 LRRC4Q9HBW1 653 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms