RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 OR1G1P47890 313 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 CHORDC1Q9UHD1 332 aaPredicted RBP14.35□□□□□ -0.11
COL4A3-202ENST00000396578 F5H5T6 163 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 H3BMM5 538 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 CD3EAPO15446 510 aaKnown RBP14.35□□□□□ -0.11
COL4A3-202ENST00000396578 HS6ST1O60243 411 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 GLP2RO95838 553 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 GH1P01241 217 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 SKIV2LQ15477 1246 aaKnown RBP14.35□□□□□ -0.11
COL4A3-202ENST00000396578 CAVIN3Q969G5 261 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 DPP3Q9NY33 737 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 ATP5BP06576 529 aaKnown RBP14.35□□□□□ -0.11
COL4A3-202ENST00000396578 EPS8Q12929 822 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 MZT2BQ6NZ67 158 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 GJB7Q6PEY0 223 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 SH3BP4Q9P0V3 963 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 H3BN98 237 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 LDLRP01130 860 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 NECAB2Q7Z6G3 386 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 NACC2Q96BF6 587 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 MYLK2Q9H1R3 596 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 GPAMQ9HCL2 828 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 RWDD3Q9Y3V2 267 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 PRR23AA6NEV1 266 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 STX11O75558 287 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 TSPAN19P0C672 248 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 ERVK-10P10266 1014 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 TKTP29401 623 aaKnown RBP14.34□□□□□ -0.11
COL4A3-202ENST00000396578 B3GNT6Q6ZMB0 384 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 SERAC1Q96JX3 654 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 BCL2L14Q9BZR8 327 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 BTBD3Q9Y2F9 522 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 ANXA6P08133 673 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 RPA1P27694 616 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 PRKAA2P54646 552 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 EPC2Q52LR7 807 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 PEG10Q86TG7 708 aaKnown RBP14.34□□□□□ -0.11
COL4A3-202ENST00000396578 PPP1R3GB7ZBB8 358 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 CLOCKO15516 846 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 MPP3Q13368 585 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 ZNF284Q2VY69 593 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 EPB41L4BQ9H329 900 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 POLR1BQ9H9Y6 1135 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 PTGES3LE9PB15 166 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 STAU1O95793 577 aaKnown RBP14.34□□□□□ -0.11
COL4A3-202ENST00000396578 FASTKQ14296 549 aaKnown RBP14.34□□□□□ -0.11
COL4A3-202ENST00000396578 TKFCQ3LXA3 575 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 TIMM50Q3ZCQ8 353 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 TMEM132CQ8N3T6 1108 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 SPPL2AQ8TCT8 520 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 MED8Q96G25 268 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 ZNF184Q99676 751 aaPredicted RBP14.34□□□□□ -0.11
COL4A3-202ENST00000396578 GANQ9H2C0 597 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 C17orf75Q9HAS0 396 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 THAP1Q9NVV9 213 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 ABI2Q9NYB9 513 aaPredicted RBP14.34□□□□□ -0.11
COL4A3-202ENST00000396578 ACOT9Q9Y305 439 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 LBPP18428 481 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 CENPIQ92674 756 aaPredicted RBP14.34□□□□□ -0.11
COL4A3-202ENST00000396578 TMEM121Q9BTD3 319 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 MYH6P13533 1939 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 A0A087WXM4 84 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 BTN3A3O00478 584 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 RAG1P15918 1043 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 ZNF772Q68DY9 489 aaPredicted RBP14.34□□□□□ -0.11
COL4A3-202ENST00000396578 SLC20A1Q8WUM9 679 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 TINF2Q9BSI4 451 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 WDR41Q9HAD4 459 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 NDUFAF1Q9Y375 327 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 ZNF609O15014 1411 aa14.34□□□□□ -0.11
COL4A3-202ENST00000396578 SKIV2L2P42285 1042 aaKnown RBP14.33□□□□□ -0.11
COL4A3-202ENST00000396578 TAF6P49848 677 aa14.33□□□□□ -0.11
COL4A3-202ENST00000396578 HMGCS2P54868 508 aa14.33□□□□□ -0.11
COL4A3-202ENST00000396578 XRCC4Q13426 336 aa14.33□□□□□ -0.11
COL4A3-202ENST00000396578 CEP170Q5SW79 1584 aa14.33□□□□□ -0.11
COL4A3-202ENST00000396578 ZDHHC13Q8IUH4 622 aa14.33□□□□□ -0.11
COL4A3-202ENST00000396578 NARFQ9UHQ1 456 aa14.33□□□□□ -0.11
COL4A3-202ENST00000396578 MAGEB16A2A368 324 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 SNAP23O00161 211 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 CTSHP09668 335 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 STAT5AP42229 794 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 ATAD3BQ5T9A4 648 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 EXOC3L1Q86VI1 746 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 SYNE4Q8N205 404 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 MCM8Q9UJA3 840 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 TBC1D12O60347 775 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 HNMTP50135 292 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 PUDPQ08623 228 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 STOX1Q6ZVD7 989 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 ZNF605Q86T29 641 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 RAET1EQ8TD07 263 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 KAT2BQ92831 832 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 CROTQ9UKG9 612 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 AFF2P51816 1311 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 RAD51BO15315 384 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 GAS2O43903 313 aaKnown RBP14.33□□□□□ -0.12
COL4A3-202ENST00000396578 AHSPQ9NZD4 102 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 PLAGL2Q9UPG8 496 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 GSTK1Q9Y2Q3 226 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 FLT1P17948 1338 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms