RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 PAX3P23760 479 aa15.51■□□□□ 0.07
CBX3-202ENST00000396386 NDUFV1P49821 464 aa15.51■□□□□ 0.07
CBX3-202ENST00000396386 GBE1Q04446 702 aa15.51■□□□□ 0.07
CBX3-202ENST00000396386 DEUP1Q05D60 604 aa15.51■□□□□ 0.07
CBX3-202ENST00000396386 TUSC3Q13454 348 aa15.51■□□□□ 0.07
CBX3-202ENST00000396386 RASA2Q15283 850 aa15.51■□□□□ 0.07
CBX3-202ENST00000396386 EFHC2Q5JST6 749 aa15.51■□□□□ 0.07
CBX3-202ENST00000396386 NCBP2-AS2Q69YL0 99 aa15.51■□□□□ 0.07
CBX3-202ENST00000396386 CPLX4Q7Z7G2 160 aa15.51■□□□□ 0.07
CBX3-202ENST00000396386 DYDC1Q8WWB3 177 aa15.51■□□□□ 0.07
CBX3-202ENST00000396386 MAML1Q92585 1016 aa15.51■□□□□ 0.07
CBX3-202ENST00000396386 WDR83Q9BRX9 315 aaKnown RBP15.51■□□□□ 0.07
CBX3-202ENST00000396386 KCNK9Q9NPC2 374 aa15.51■□□□□ 0.07
CBX3-202ENST00000396386 CNGB3Q9NQW8 809 aa15.51■□□□□ 0.07
CBX3-202ENST00000396386 PSMC3IPQ9P2W1 217 aaPredicted RBP15.51■□□□□ 0.07
CBX3-202ENST00000396386 DSEQ9UL01 958 aa15.51■□□□□ 0.07
CBX3-202ENST00000396386 SQORQ9Y6N5 450 aa15.51■□□□□ 0.07
CBX3-202ENST00000396386 FAM169AQ9Y6X4 670 aa15.51■□□□□ 0.07
CBX3-202ENST00000396386 COL4A4P53420 1690 aaPredicted RBP15.51■□□□□ 0.07
CBX3-202ENST00000396386 RASA4BC9J798 803 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 M0QYT0 321 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 RASA4O43374 803 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 AOC2O75106 756 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 POMCP01189 267 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 CREB1P16220 341 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 IFNAR2P48551 515 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 ACLYP53396 1101 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 PITX1P78337 314 aaPredicted RBP15.5■□□□□ 0.07
CBX3-202ENST00000396386 QPCTQ16769 361 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 KLHL38Q2WGJ6 581 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 RAB41Q5JT25 222 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 HFE2Q6ZVN8 426 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 TRABD2AQ86V40 505 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 PYROXD2Q8N2H3 581 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 ANKRD42Q8N9B4 389 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 ZMIZ2Q8NF64 920 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 MGARPQ8TDB4 240 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 MYLPFQ96A32 169 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 ZNF317Q96PQ6 595 aaPredicted RBP15.5■□□□□ 0.07
CBX3-202ENST00000396386 NSRP1Q9H0G5 558 aaKnown RBP15.5■□□□□ 0.07
CBX3-202ENST00000396386 ACSS3Q9H6R3 686 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 ETNK2Q9NVF9 386 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 SENP1Q9P0U3 644 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 SRRDQ9UH36 339 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 INPP5FQ9Y2H2 1132 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 SYNJ2BP-COX16A0A087WUM0 186 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 FOXO6A8MYZ6 492 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 HACD1B0YJ81 288 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 C9IYK1 514 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 I3L4J1 428 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 NRP1O14786 923 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 CAPN9O14815 690 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 B3GAT3O94766 335 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 KIAA0754O94854 1291 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 CYP11A1P05108 521 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 MAGEA6P43360 314 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 AIF1P55008 147 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 GEMIN4P57678 1058 aaKnown RBP15.5■□□□□ 0.07
CBX3-202ENST00000396386 MAP3K21Q5TCX8 1036 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 GPRIN1Q7Z2K8 1008 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 ECHDC2Q86YB7 292 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 PALM2Q8IXS6 379 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 RNF139Q8WU17 664 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 RTP3Q9BQQ7 232 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 NKIRAS1Q9NYS0 192 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 COX16Q9P0S2 106 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 RABGEF1Q9UJ41 708 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 CHMP2BQ9UQN3 213 aa15.5■□□□□ 0.07
CBX3-202ENST00000396386 SF3B1O75533 1304 aaKnown RBP eCLIP15.49■□□□□ 0.073e-6■■■□□ 15.6
CBX3-202ENST00000396386 ARHGEF37A1IGU5 675 aa15.49■□□□□ 0.07
CBX3-202ENST00000396386 AMPD1P23109 780 aa15.49■□□□□ 0.07
CBX3-202ENST00000396386 HOXD10P28358 340 aa15.49■□□□□ 0.07
CBX3-202ENST00000396386 SSTR1P30872 391 aa15.49■□□□□ 0.07
CBX3-202ENST00000396386 BRCC3P46736 316 aa15.49■□□□□ 0.07
CBX3-202ENST00000396386 CACNA2D1P54289 1103 aa15.49■□□□□ 0.07
CBX3-202ENST00000396386 SLC10A2Q12908 348 aaPredicted RBP15.49■□□□□ 0.07
CBX3-202ENST00000396386 CBLBQ13191 982 aa15.49■□□□□ 0.07
CBX3-202ENST00000396386 NME3Q13232 169 aa15.49■□□□□ 0.07
CBX3-202ENST00000396386 PAN2Q504Q3 1202 aaKnown RBP15.49■□□□□ 0.07
CBX3-202ENST00000396386 INTS6LQ5JSJ4 861 aaKnown RBP15.49■□□□□ 0.07
CBX3-202ENST00000396386 GKAP1Q5VSY0 366 aaPredicted RBP15.49■□□□□ 0.07
CBX3-202ENST00000396386 SYPL2Q5VXT5 272 aa15.49■□□□□ 0.07
CBX3-202ENST00000396386 ARHGEF18Q6ZSZ5 1173 aa15.49■□□□□ 0.07
CBX3-202ENST00000396386 BZW1Q7L1Q6 419 aaKnown RBP15.49■□□□□ 0.07
CBX3-202ENST00000396386 REM2Q8IYK8 340 aaPredicted RBP15.49■□□□□ 0.07
CBX3-202ENST00000396386 CACNA2D3Q8IZS8 1091 aa15.49■□□□□ 0.07
CBX3-202ENST00000396386 VPS52Q8N1B4 723 aa15.49■□□□□ 0.07
CBX3-202ENST00000396386 SLC7A14Q8TBB6 771 aa15.49■□□□□ 0.07
CBX3-202ENST00000396386 OLFM3Q96PB7 478 aa15.49■□□□□ 0.07
CBX3-202ENST00000396386 ACBD6Q9BR61 282 aa15.49■□□□□ 0.07
CBX3-202ENST00000396386 MAGEB5Q9BZ81 275 aa15.49■□□□□ 0.07
CBX3-202ENST00000396386 ARHGEF4Q9NR80 690 aa15.49■□□□□ 0.07
CBX3-202ENST00000396386 DTLQ9NZJ0 730 aa15.49■□□□□ 0.07
CBX3-202ENST00000396386 YJEFN3A6XGL0 299 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 HHLA1C9JL84 531 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 E7ENQ6 273 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 M0QZQ0 153 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 MFSD11O43934 449 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 GCATO75600 419 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 SPAG6O75602 509 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms