RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 EBNA1BP2Q99848 306 aaKnown RBP16.27■□□□□ 0.19
HOXA3-202ENST00000396352 NGRNQ9NPE2 291 aaKnown RBP16.27■□□□□ 0.19
HOXA3-202ENST00000396352 TAGLN3Q9UI15 199 aa16.27■□□□□ 0.19
HOXA3-202ENST00000396352 NOP56O00567 594 aaKnown RBP16.26■□□□□ 0.19
HOXA3-202ENST00000396352 SKIP12755 728 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 SLC10A6Q3KNW5 377 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 NET1Q7Z628 596 aaPredicted RBP16.26■□□□□ 0.19
HOXA3-202ENST00000396352 FGD4Q96M96 766 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 PANX3Q96QZ0 392 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 ZNF670Q9BS34 389 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 ASB3Q9Y575 518 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 PAPPA2Q9BXP8 1791 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 MCM3APO60318 1980 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 PPP1R12AO14974 1030 aaPredicted RBP16.26■□□□□ 0.19
HOXA3-202ENST00000396352 BIRC5O15392 142 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 TM7SF2O76062 418 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 GSRP00390 522 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 P4HA1P13674 534 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 KDSRQ06136 332 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 OR52E8Q6IFG1 317 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 PMF1Q6P1K2 205 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 EP400NLQ6ZTU2 488 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 NCAPG2Q86XI2 1143 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 APOBEC3FQ8IUX4 373 aaKnown RBP16.26■□□□□ 0.19
HOXA3-202ENST00000396352 CLPTM1LQ96KA5 538 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 NFKBIZQ9BYH8 718 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 PDZD7Q9H5P4 517 aa16.26■□□□□ 0.19
HOXA3-202ENST00000396352 MDM4O15151 490 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 MCF2P10911 925 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 GRIA1P42261 906 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 SLC10A2Q12908 348 aaPredicted RBP16.25■□□□□ 0.19
HOXA3-202ENST00000396352 GOLGA7BQ2TAP0 167 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 ZCCHC23Q6ZST2 131 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 CRLF3Q8IUI8 442 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 APLFQ8IW19 511 aaPredicted RBP16.25■□□□□ 0.19
HOXA3-202ENST00000396352 SCUBE1Q8IWY4 988 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 ULK2Q8IYT8 1036 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 STKLD1Q8NE28 680 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 TBCBQ99426 244 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 EBF4Q9BQW3 602 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 SPATC1LQ9H0A9 340 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 ASB7Q9H672 318 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 NRDE2Q9H7Z3 1164 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 DLGAP2Q9P1A6 1054 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 PCDHA11Q9Y5I1 949 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 MAD1L1Q9Y6D9 718 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 PLXNA1Q9UIW2 1896 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 GCATO75600 419 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 TPSB2P20231 275 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 HDAC4P56524 1084 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 MXRA7P84157 204 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 TPSAB1Q15661 275 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 RIPOR1Q6ZS17 1223 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 IFT43Q96FT9 208 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 PRMT7Q9NVM4 692 aaPredicted RBP16.25■□□□□ 0.19
HOXA3-202ENST00000396352 ENO4A6NNW6 628 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 PRR5-ARHGAP8B1AHC4 643 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 GABBR2O75899 941 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 TFE3P19532 575 aaPredicted RBP16.25■□□□□ 0.19
HOXA3-202ENST00000396352 ALDH18A1P54886 795 aaKnown RBP16.25■□□□□ 0.19
HOXA3-202ENST00000396352 ARHGAP8P85298 464 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 GBE1Q04446 702 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 PKDCCQ504Y2 493 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 CDKL3Q8IVW4 592 aaPredicted RBP16.25■□□□□ 0.19
HOXA3-202ENST00000396352 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.25■□□□□ 0.19
HOXA3-202ENST00000396352 CPB2Q96IY4 423 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 ZNF778Q96MU6 729 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 SPATA33Q96N06 139 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 MIS12Q9H081 205 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 SLC7A8Q9UHI5 535 aa16.25■□□□□ 0.19
HOXA3-202ENST00000396352 CITO14578 2027 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 SERPINA6P08185 405 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 CYP2F1P24903 491 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 WASHC5Q12768 1159 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 TUBB3Q13509 450 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 UBAP2LQ14157 1087 aaKnown RBP16.24■□□□□ 0.19
HOXA3-202ENST00000396352 FAM187BQ17R55 369 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 PPP6R3Q5H9R7 873 aaPredicted RBP16.24■□□□□ 0.19
HOXA3-202ENST00000396352 ZNF772Q68DY9 489 aaPredicted RBP16.24■□□□□ 0.19
HOXA3-202ENST00000396352 TIFABQ6ZNK6 161 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 ARCQ7LC44 396 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 TTC30AQ86WT1 665 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 MYLK4Q86YV6 388 aaPredicted RBP16.24■□□□□ 0.19
HOXA3-202ENST00000396352 ZNF184Q99676 751 aaPredicted RBP16.24■□□□□ 0.19
HOXA3-202ENST00000396352 MOCS1Q9NZB8 636 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 SDR42E2A6NKP2 422 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 ZNF487B1APH4 448 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 SPECC1L-ADORA2AF8WAN1 911 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 MAP3K7O43318 606 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 C22orf31O95567 290 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 SDC4P31431 198 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 ACTR3P61158 418 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 PRKG1Q13976 671 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 TMEM132DQ14C87 1099 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 TBCCQ15814 346 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 DALRD3Q5D0E6 543 aaKnown RBP16.24■□□□□ 0.19
HOXA3-202ENST00000396352 PPP1R26Q5T8A7 1209 aaPredicted RBP16.24■□□□□ 0.19
HOXA3-202ENST00000396352 C4orf22Q6V702 233 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 NT5C1AQ9BXI3 368 aa16.24■□□□□ 0.19
HOXA3-202ENST00000396352 EMCNQ9ULC0 261 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms