RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 NMUR1Q9HB89 426 aa14.25□□□□□ -0.13
SCAF11-203ENST00000395453 SPHK2Q9NRA0 654 aa14.25□□□□□ -0.13
SCAF11-203ENST00000395453 CISHQ9NSE2 258 aa14.25□□□□□ -0.13
SCAF11-203ENST00000395453 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.25□□□□□ -0.13
SCAF11-203ENST00000395453 MYO18AQ92614 2054 aaKnown RBP14.24□□□□□ -0.13
SCAF11-203ENST00000395453 A0A1W2PQH9 124 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.24□□□□□ -0.13
SCAF11-203ENST00000395453 H0Y626 953 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 TRIM16O95361 564 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 APODP05090 189 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 SEC13P55735 322 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 SIM1P81133 766 aaPredicted RBP14.24□□□□□ -0.13
SCAF11-203ENST00000395453 LRRC63Q05C16 580 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 CRY1Q16526 586 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 CBWD6Q4V339 395 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 ZNF394Q53GI3 561 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 TRIM61Q5EBN2 209 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 CBWD3Q5JTY5 395 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 CBWD5Q5RIA9 395 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 EMC10Q5UCC4 262 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 SCD5Q86SK9 330 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 RASSF3Q86WH2 238 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 IL17RCQ8NAC3 791 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 SMARCE1Q969G3 411 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 TMEM176AQ96HP8 235 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 HEXIM2Q96MH2 286 aaKnown RBP14.24□□□□□ -0.13
SCAF11-203ENST00000395453 TSG101Q99816 390 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 ARID3AQ99856 593 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 TPSD1Q9BZJ3 242 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 NACA2Q9H009 215 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 ARHGEF4Q9NR80 690 aa14.24□□□□□ -0.13
SCAF11-203ENST00000395453 FAM221BA6H8Z2 402 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 UPK3BL1B0FP48 263 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 UPK3BL2E5RIL1 263 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 RARGP13631 454 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 HNRNPLP14866 589 aaKnown RBP eCLIP14.23□□□□□ -0.131e-8■■□□□ 12.8
SCAF11-203ENST00000395453 BCKDHBP21953 392 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 MAPK8P45983 427 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 PLA2G4AP47712 749 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 GON4LQ3T8J9 2241 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 ARHGAP17Q68EM7 881 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 ANO7Q6IWH7 933 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 TMEM92Q6UXU6 159 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 LPCAT2Q7L5N7 544 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 PROSER1Q86XN7 944 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 CCDC33Q8N5R6 958 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 ALLCQ8N6M5 410 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 KCNV2Q8TDN2 545 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 SLC35C1Q96A29 364 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 JAKMIP2Q96AA8 810 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 CNOT6LQ96LI5 555 aaKnown RBP14.23□□□□□ -0.13
SCAF11-203ENST00000395453 CLIC5Q9NZA1 410 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 HOOK1Q9UJC3 728 aaKnown RBP14.23□□□□□ -0.13
SCAF11-203ENST00000395453 DNMT3LQ9UJW3 386 aa14.23□□□□□ -0.13
SCAF11-203ENST00000395453 SMG1Q96Q15 3661 aaKnown RBP14.23□□□□□ -0.13
SCAF11-203ENST00000395453 FLNBO75369 2602 aaKnown RBP14.23□□□□□ -0.13
SCAF11-203ENST00000395453 SPAARA0A1B0GVQ0 90 aa14.22□□□□□ -0.13
SCAF11-203ENST00000395453 TRIM49BA6NDI0 452 aa14.22□□□□□ -0.13
SCAF11-203ENST00000395453 PMM2O15305 246 aa14.22□□□□□ -0.13
SCAF11-203ENST00000395453 TULP3O75386 442 aa14.22□□□□□ -0.13
SCAF11-203ENST00000395453 IRF1P10914 325 aa14.22□□□□□ -0.13
SCAF11-203ENST00000395453 DPP6P42658 865 aa14.22□□□□□ -0.13
SCAF11-203ENST00000395453 PREPLQ4J6C6 727 aaPredicted RBP14.22□□□□□ -0.13
SCAF11-203ENST00000395453 RAB41Q5JT25 222 aa14.22□□□□□ -0.13
SCAF11-203ENST00000395453 TCERG1LQ5VWI1 586 aa14.22□□□□□ -0.13
SCAF11-203ENST00000395453 BTBD8Q5XKL5 378 aa14.22□□□□□ -0.13
SCAF11-203ENST00000395453 Q6ZNB5 142 aa14.22□□□□□ -0.13
SCAF11-203ENST00000395453 PIP4P1Q86T03 277 aa14.22□□□□□ -0.13
SCAF11-203ENST00000395453 SYT12Q8IV01 421 aa14.22□□□□□ -0.13
SCAF11-203ENST00000395453 NAT16Q8N8M0 369 aa14.22□□□□□ -0.13
SCAF11-203ENST00000395453 ANKRD52Q8NB46 1076 aa14.22□□□□□ -0.13
SCAF11-203ENST00000395453 TXNDC5Q8NBS9 432 aaKnown RBP14.22□□□□□ -0.13
SCAF11-203ENST00000395453 OLIG1Q8TAK6 271 aa14.22□□□□□ -0.13
SCAF11-203ENST00000395453 DHTKD1Q96HY7 919 aaPredicted RBP14.22□□□□□ -0.13
SCAF11-203ENST00000395453 MARK1Q9P0L2 795 aa14.22□□□□□ -0.13
SCAF11-203ENST00000395453 DEC1Q9P2X7 70 aa14.22□□□□□ -0.13
SCAF11-203ENST00000395453 ARMCX3Q9UH62 379 aaPredicted RBP14.22□□□□□ -0.13
SCAF11-203ENST00000395453 GPSM3Q9Y4H4 160 aa14.22□□□□□ -0.13
SCAF11-203ENST00000395453 ADAMTS20P59510 1910 aa14.21□□□□□ -0.13
SCAF11-203ENST00000395453 TBC1D3BA6NDS4 549 aa14.21□□□□□ -0.13
SCAF11-203ENST00000395453 SGK1O00141 431 aa14.21□□□□□ -0.13
SCAF11-203ENST00000395453 CACNG3O60359 315 aa14.21□□□□□ -0.13
SCAF11-203ENST00000395453 ADAM23O75077 832 aa14.21□□□□□ -0.13
SCAF11-203ENST00000395453 ALDH1A2O94788 518 aa14.21□□□□□ -0.13
SCAF11-203ENST00000395453 KLF8O95600 359 aaPredicted RBP14.21□□□□□ -0.13
SCAF11-203ENST00000395453 ENGP17813 658 aa14.21□□□□□ -0.13
SCAF11-203ENST00000395453 KDSRQ06136 332 aa14.21□□□□□ -0.13
SCAF11-203ENST00000395453 GOLGA8FQ08AF8 430 aa14.21□□□□□ -0.13
SCAF11-203ENST00000395453 GOLGA8DPQ0D2H9 430 aa14.21□□□□□ -0.13
SCAF11-203ENST00000395453 SEMA3BQ13214 749 aa14.21□□□□□ -0.13
SCAF11-203ENST00000395453 CUL2Q13617 745 aa14.21□□□□□ -0.13
SCAF11-203ENST00000395453 ANO4Q32M45 955 aa14.21□□□□□ -0.13
SCAF11-203ENST00000395453 SOWAHCQ53LP3 525 aaPredicted RBP14.21□□□□□ -0.13
SCAF11-203ENST00000395453 DCAF17Q5H9S7 520 aaPredicted RBP14.21□□□□□ -0.13
SCAF11-203ENST00000395453 C10orf120Q5SQS8 335 aa14.21□□□□□ -0.13
SCAF11-203ENST00000395453 FOXR2Q6PJQ5 311 aa14.21□□□□□ -0.13
SCAF11-203ENST00000395453 TTC30AQ86WT1 665 aa14.21□□□□□ -0.13
SCAF11-203ENST00000395453 HDDC3Q8N4P3 179 aa14.21□□□□□ -0.13
SCAF11-203ENST00000395453 UBR7Q8N806 425 aa14.21□□□□□ -0.13
SCAF11-203ENST00000395453 TERB1Q8NA31 727 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms