RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 TRIP4Q15650 581 aaPredicted RBP13.97□□□□□ -0.17
HLA-DMA-202ENST00000395303 SKOR2Q2VWA4 1001 aaPredicted RBP13.97□□□□□ -0.17
HLA-DMA-202ENST00000395303 LY6G5CQ5SRR4 150 aa13.97□□□□□ -0.17
HLA-DMA-202ENST00000395303 NAIF1Q69YI7 327 aaPredicted RBP13.97□□□□□ -0.17
HLA-DMA-202ENST00000395303 ETFBKMTQ8IXQ9 262 aa13.97□□□□□ -0.17
HLA-DMA-202ENST00000395303 PHTF2Q8N3S3 785 aa13.97□□□□□ -0.17
HLA-DMA-202ENST00000395303 CLEC4CQ8WTT0 213 aa13.97□□□□□ -0.17
HLA-DMA-202ENST00000395303 DDX1Q92499 740 aaKnown RBP13.97□□□□□ -0.17
HLA-DMA-202ENST00000395303 PLD4Q96BZ4 506 aa13.97□□□□□ -0.17
HLA-DMA-202ENST00000395303 RBM12Q9NTZ6 932 aaKnown RBP13.97□□□□□ -0.17
HLA-DMA-202ENST00000395303 MARK1Q9P0L2 795 aa13.97□□□□□ -0.17
HLA-DMA-202ENST00000395303 STRIP2Q9ULQ0 834 aa13.97□□□□□ -0.17
HLA-DMA-202ENST00000395303 HBS1LQ9Y450 684 aaKnown RBP13.97□□□□□ -0.17
HLA-DMA-202ENST00000395303 PLXND1Q9Y4D7 1925 aa13.97□□□□□ -0.17
HLA-DMA-202ENST00000395303 NCOR2Q9Y618 2525 aa13.97□□□□□ -0.17
HLA-DMA-202ENST00000395303 DOCK4Q8N1I0 1966 aa13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 SYCE3A1L190 88 aa13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 E5RJQ4 531 aa13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 PIK3R2O00459 728 aa13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 EPHB6O15197 1021 aa13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 EGFP01133 1207 aa13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 ADH5P11766 374 aa13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 CYP11B1P15538 503 aa13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 CCR3P51677 355 aa13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 POLR2FP61218 127 aaKnown RBP13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 PDCLQ13371 301 aa13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 SYCP1Q15431 976 aa13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 Q6ZS52 159 aa13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 RSRC2Q7L4I2 434 aaKnown RBP13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 TMEM25Q86YD3 366 aa13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 MIB1Q86YT6 1006 aa13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 FMNL3Q8IVF7 1028 aa13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 FAM217AQ8IXS0 508 aa13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 CPXM2Q8N436 756 aa13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 EDEM1Q92611 657 aa13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 ST7Q9NRC1 585 aa13.96□□□□□ -0.17
HLA-DMA-202ENST00000395303 CKAP5Q14008 2032 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 SLC12A8A0AV02 714 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 CHURC1-FNTBB4DL54 471 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 LATS1O95835 1130 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 IGLV3-27P01718 113 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 GLI1P08151 1106 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 CHRM1P11229 460 aaPredicted RBP13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 KRT9P35527 623 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 UBXN1Q04323 297 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 NNTQ13423 1086 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 C12orf40Q86WS4 652 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 ZNF677Q86XU0 584 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 SCUBE3Q8IX30 993 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 EPS8L1Q8TE68 723 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 RNF139Q8WU17 664 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 RMDN1Q96DB5 314 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 CPXM1Q96SM3 734 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 PNKPQ96T60 521 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 TRIM62Q9BVG3 475 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 FAM126AQ9BYI3 521 aaPredicted RBP13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 MIS12Q9H081 205 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 RTN4Q9NQC3 1192 aaKnown RBP13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 FAM207AQ9NSI2 230 aaPredicted RBP13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 ASNSD1Q9NWL6 643 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 TJP2Q9UDY2 1190 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 SFMBT1Q9UHJ3 866 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 STOML2Q9UJZ1 356 aa13.95□□□□□ -0.18
HLA-DMA-202ENST00000395303 DNAH14Q0VDD8 3507 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 K7EQS6 105 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 GFRA2O00451 464 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 CACNG3O60359 315 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 CAVIN2O95810 425 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 CORO1AP31146 461 aaKnown RBP13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 HOXA6P31267 233 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 SOX5P35711 763 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 CHKAP35790 457 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 SLC6A11P48066 632 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 SATB1Q01826 763 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 RING1Q06587 406 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 ZSCAN23Q3MJ62 389 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 ZBTB44Q8NCP5 570 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 C1orf131Q8NDD1 294 aaKnown RBP13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 CCDC26Q8TAB7 109 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 GOLGA1Q92805 767 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 PPP1R13BQ96KQ4 1090 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 NOX5Q96PH1 765 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 WDR35Q9P2L0 1181 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 NOCTQ9UK39 431 aaKnown RBP13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 FBXO10Q9UK96 956 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 AGO1Q9UL18 857 aaKnown RBP13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 CEP192Q8TEP8 1941 aa13.94□□□□□ -0.18
HLA-DMA-202ENST00000395303 A0A1B0GTH6 734 aa13.93□□□□□ -0.18
HLA-DMA-202ENST00000395303 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.93□□□□□ -0.18
HLA-DMA-202ENST00000395303 K7ESF4 209 aa13.93□□□□□ -0.18
HLA-DMA-202ENST00000395303 TEX33O43247 280 aa13.93□□□□□ -0.18
HLA-DMA-202ENST00000395303 LILRB5O75023 590 aa13.93□□□□□ -0.18
HLA-DMA-202ENST00000395303 ATG13O75143 517 aa13.93□□□□□ -0.18
HLA-DMA-202ENST00000395303 RNF40O75150 1001 aa13.93□□□□□ -0.18
HLA-DMA-202ENST00000395303 TULP3O75386 442 aa13.93□□□□□ -0.18
HLA-DMA-202ENST00000395303 PENKP01210 267 aaPredicted RBP13.93□□□□□ -0.18
HLA-DMA-202ENST00000395303 IGLV3-25P01717 112 aa13.93□□□□□ -0.18
HLA-DMA-202ENST00000395303 APODP05090 189 aa13.93□□□□□ -0.18
HLA-DMA-202ENST00000395303 HMBSP08397 361 aa13.93□□□□□ -0.18
HLA-DMA-202ENST00000395303 SCNN1AP37088 669 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms