RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 OSGEPQ9NPF4 335 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 GIMAP4Q9NUV9 329 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 NKX1-2Q9UD57 310 aaPredicted RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 WARS2Q9UGM6 360 aaKnown RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 MTO1Q9Y2Z2 717 aaKnown RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 HBS1LQ9Y450 684 aaKnown RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 TTLL3Q9Y4R7 772 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 ARIH1Q9Y4X5 557 aaPredicted RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 GOLGA8RI6L899 631 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 CYB561D2O14569 222 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 B4GALT5O43286 388 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 PHF2O75151 1096 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 DUSP11O75319 330 aaKnown RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 GFAPP14136 432 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 ABL2P42684 1182 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 RAP1GAPP47736 663 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 CRYBB1P53674 252 aaPredicted RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 ALDH18A1P54886 795 aaKnown RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 YWHAGP61981 247 aaKnown RBP eCLIP5.88□□□□□ -1.47
RFFL-202ENST00000394597 CAV1Q03135 178 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 ARHGAP1Q07960 439 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 FSTL1Q12841 308 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 MTFR1Q15390 333 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 OASLQ15646 514 aaKnown RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 FBXO47Q5MNV8 452 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 LVRNQ6Q4G3 990 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 TMC5Q6UXY8 1006 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 ZNF572Q7Z3I7 529 aaPredicted RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 ACOT1Q86TX2 421 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 DNAAF5Q86Y56 855 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 SPATA2LQ8IUW3 424 aaPredicted RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 MCOLN2Q8IZK6 566 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 CATSPER1Q8NEC5 780 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 CKAP2Q8WWK9 683 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 SHC3Q92529 594 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 VCPIP1Q96JH7 1222 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 COQ7Q99807 217 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 ZBED2Q9BTP6 218 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 TRIM62Q9BVG3 475 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 WWP1Q9H0M0 922 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 ZMYND8Q9ULU4 1186 aaPredicted RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 PRELID1Q9Y255 219 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 PCDHB7Q9Y5E2 793 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 ADCY6O43306 1168 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 FKBP6O75344 327 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 B3GAT3O94766 335 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 NOL4O94818 638 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 ZBED1O96006 694 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 KRT8P05787 483 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 ARF4P18085 180 aaPredicted RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 RRM1P23921 792 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 FLT3P36888 993 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 RPL5P46777 297 aaKnown RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 OR1G1P47890 313 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 CDH6P55285 790 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 PRAMEP78395 509 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 KRT17Q04695 432 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 C1QBPQ07021 282 aaKnown RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 ORC1Q13415 861 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 GRB14Q14449 540 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 ADRM1Q16186 407 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 BSPRYQ5W0U4 402 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 CENPUQ71F23 418 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 OR5B17Q8NGF7 314 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 ATL2Q8NHH9 583 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 GABPB2Q8TAK5 448 aaPredicted RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 PPP1R13LQ8WUF5 828 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 C1orf54Q8WWF1 131 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 SNF8Q96H20 258 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 CAPNS2Q96L46 248 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 PRPF18Q99633 342 aaKnown RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 CCDC28BQ9BUN5 200 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 EFHD1Q9BUP0 239 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 TMEM106CQ9BVX2 250 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 LRMDAQ9H2I8 198 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 RRN3Q9NYV6 651 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 APOBEC2Q9Y235 224 aaKnown RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 TRIM17Q9Y577 477 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 MYH8P13535 1937 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 RGS20O76081 388 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 ASMTLO95671 621 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 PRKAR2AP13861 404 aaKnown RBP5.87□□□□□ -1.47
RFFL-202ENST00000394597 EDNRBP24530 442 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 TRPC1P48995 793 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 C21orf59P57076 290 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 MRPS6P82932 125 aaKnown RBP5.87□□□□□ -1.47
RFFL-202ENST00000394597 ENPEPQ07075 957 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 CRHR2Q13324 411 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 EFHC1Q5JVL4 640 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 CYP4A22Q5TCH4 519 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 NXNQ6DKJ4 435 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 PLEKHA7Q6IQ23 1121 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 EPS8L1Q8TE68 723 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 USP33Q8TEY7 942 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 PYROXD1Q8WU10 500 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 ZNF333Q96JL9 665 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 ZFRQ96KR1 1074 aaKnown RBP5.87□□□□□ -1.47
RFFL-202ENST00000394597 ECSITQ9BQ95 431 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 ZSWIM1Q9BR11 485 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 TTYH3Q9C0H2 523 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms