RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TROVE2P10155 538 aaKnown RBP eCLIP13.99□□□□□ -0.17
GTF2F1-201ENST00000394456 ARFIP2P53365 341 aa13.99□□□□□ -0.17
GTF2F1-201ENST00000394456 HDAC4P56524 1084 aa13.99□□□□□ -0.17
GTF2F1-201ENST00000394456 BCAR1P56945 870 aa13.99□□□□□ -0.17
GTF2F1-201ENST00000394456 MROH9Q5TGP6 573 aa13.99□□□□□ -0.17
GTF2F1-201ENST00000394456 IQSEC1Q6DN90 963 aa13.99□□□□□ -0.17
GTF2F1-201ENST00000394456 OLFML1Q6UWY5 402 aa13.99□□□□□ -0.17
GTF2F1-201ENST00000394456 ZNF534Q76KX8 674 aa13.99□□□□□ -0.17
GTF2F1-201ENST00000394456 C7orf31Q8N865 590 aa13.99□□□□□ -0.17
GTF2F1-201ENST00000394456 PTCD3Q96EY7 689 aaKnown RBP13.99□□□□□ -0.17
GTF2F1-201ENST00000394456 KIF12Q96FN5 646 aa13.99□□□□□ -0.17
GTF2F1-201ENST00000394456 RSRC1Q96IZ7 334 aaKnown RBP13.99□□□□□ -0.17
GTF2F1-201ENST00000394456 OSMRQ99650 979 aa13.99□□□□□ -0.17
GTF2F1-201ENST00000394456 NMUR2Q9GZQ4 415 aa13.99□□□□□ -0.17
GTF2F1-201ENST00000394456 CNTN3Q9P232 1028 aa13.99□□□□□ -0.17
GTF2F1-201ENST00000394456 TUBGCP4Q9UGJ1 667 aa13.99□□□□□ -0.17
GTF2F1-201ENST00000394456 BARX2Q9UMQ3 279 aaPredicted RBP13.99□□□□□ -0.17
GTF2F1-201ENST00000394456 SNX9Q9Y5X1 595 aa13.99□□□□□ -0.17
GTF2F1-201ENST00000394456 A0A1B0GUA9 196 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 SLC15A5A6NIM6 579 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 TM9SF1O15321 606 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 ZBED1O96006 694 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 PCK1P35558 622 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 ZNF618Q5T7W0 954 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 OLFML2BQ68BL8 750 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 UNC5AQ6ZN44 842 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 APBB1IPQ7Z5R6 666 aaPredicted RBP13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 WDR60Q8WVS4 1066 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 TRIM55Q9BYV6 548 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 VPS11Q9H270 941 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 ASB7Q9H672 318 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 SSU72Q9NP77 194 aaKnown RBP13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 PCMTD2Q9NV79 361 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 HAUS5O94927 633 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 PDGFRBP09619 1106 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 SMIM10L2AP0DMW4 78 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 SMIM10L2BP0DMW5 78 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 HOXD8P13378 290 aaPredicted RBP13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 PTPN4P29074 926 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 RABGGTBP53611 331 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 ZBTB16Q05516 673 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 SLC18A2Q05940 514 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 OLIG2Q13516 323 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 HIC1Q14526 733 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 TAF11Q15544 211 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 LCLAT1Q6UWP7 414 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 TREML1Q86YW5 311 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 INPP5DQ92835 1189 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 ARHGEF4Q9NR80 690 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 SUFUQ9UMX1 484 aa13.98□□□□□ -0.17
GTF2F1-201ENST00000394456 IQANK1A0A1B0GTG1 560 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 RFPL1O75677 317 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 KRT36O76013 467 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 CCDC130P13994 396 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 CALB2P22676 271 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 PITX1P78337 314 aaPredicted RBP13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 KPNB1Q14974 876 aaKnown RBP13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 C16orf46Q6P387 395 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 CATSPER4Q7RTX7 472 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 TP53INP2Q8IXH6 220 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 STK32AQ8WU08 396 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 SKA1Q96BD8 255 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 EIF2AQ9BY44 585 aaKnown RBP13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 DHX35Q9H5Z1 703 aaKnown RBP13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 SNTG2Q9NY99 539 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 COPEO14579 308 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 APOL1O14791 398 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 CYP2B6P20813 491 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 IGFBP6P24592 240 aaPredicted RBP13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 STIP1P31948 543 aaKnown RBP13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 BEX3Q00994 111 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 BST1Q10588 318 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 TAF1CQ15572 869 aaPredicted RBP13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 TLK2Q86UE8 772 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 CCDC185Q8N715 623 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 DTX3LQ8TDB6 740 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 APOL6Q9BWW8 343 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 NT5C1AQ9BXI3 368 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 NMRK2Q9NPI5 230 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 FETUBQ9UGM5 382 aa13.97□□□□□ -0.17
GTF2F1-201ENST00000394456 FCHO1O14526 889 aa13.96□□□□□ -0.17
GTF2F1-201ENST00000394456 CYP2F1P24903 491 aa13.96□□□□□ -0.17
GTF2F1-201ENST00000394456 ADORA2BP29275 332 aa13.96□□□□□ -0.17
GTF2F1-201ENST00000394456 HOXA11P31270 313 aaPredicted RBP13.96□□□□□ -0.17
GTF2F1-201ENST00000394456 ZNF157P51786 506 aaPredicted RBP13.96□□□□□ -0.17
GTF2F1-201ENST00000394456 SOWAHAQ2M3V2 549 aa13.96□□□□□ -0.17
GTF2F1-201ENST00000394456 NBPF20Q3BBV1 942 aa13.96□□□□□ -0.17
GTF2F1-201ENST00000394456 ATG14Q6ZNE5 492 aa13.96□□□□□ -0.17
GTF2F1-201ENST00000394456 SLC26A11Q86WA9 606 aa13.96□□□□□ -0.17
GTF2F1-201ENST00000394456 CLPTM1LQ96KA5 538 aa13.96□□□□□ -0.17
GTF2F1-201ENST00000394456 ADAMTS10Q9H324 1103 aa13.96□□□□□ -0.17
GTF2F1-201ENST00000394456 TAS2R1Q9NYW7 299 aa13.96□□□□□ -0.17
GTF2F1-201ENST00000394456 SYNJ2BP-COX16A0A087WUM0 186 aa13.96□□□□□ -0.18
GTF2F1-201ENST00000394456 A6NJR5 290 aa13.96□□□□□ -0.18
GTF2F1-201ENST00000394456 CHADO15335 359 aa13.96□□□□□ -0.18
GTF2F1-201ENST00000394456 CYP2C9P11712 490 aa13.96□□□□□ -0.18
GTF2F1-201ENST00000394456 LCP1P13796 627 aa13.96□□□□□ -0.18
GTF2F1-201ENST00000394456 AMPD1P23109 780 aa13.96□□□□□ -0.18
GTF2F1-201ENST00000394456 LMO2P25791 158 aa13.96□□□□□ -0.18
GTF2F1-201ENST00000394456 PTDSS1P48651 473 aaKnown RBP13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms