RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 RAD54BQ9Y620 910 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 ASTN1O14525 1302 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 FGF10O15520 208 aaPredicted RBP14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 PPP3CAQ08209 521 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 FAM110CQ1W6H9 321 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 ANKRD23Q86SG2 305 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 LRRC52Q8N7C0 313 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 ACO2Q99798 780 aaKnown RBP14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 NT5MQ9NPB1 228 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 SELENONQ9NZV5 590 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 RNF112Q9ULX5 631 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 PLA2G4CQ9UP65 541 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 SIGLEC16A6NMB1 481 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 ANXA11P50995 505 aaKnown RBP14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 CDK16Q00536 496 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 CACHD1Q5VU97 1274 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 ZNF662Q6ZS27 426 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 SLC22A9Q8IVM8 553 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 ARID3BQ8IVW6 561 aaPredicted RBP14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 SRPK1Q96SB4 655 aaKnown RBP14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 KCTD10Q9H3F6 313 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 CLCA2Q9UQC9 943 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 FAM71AQ8IYT1 594 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 TRPM4Q8TD43 1214 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 GAD1Q99259 594 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 TLR10Q9BXR5 811 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 CDT1Q9H211 546 aa14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 SPATS2LQ9NUQ6 558 aaKnown RBP14.85□□□□□ -0.03
PPARGC1B-203ENST00000394320 B2RBV5 119 aa14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 MPOP05164 745 aa14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 SERPIND1P05546 499 aa14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 PTPN1P18031 435 aaKnown RBP14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 ACAT1P24752 427 aaKnown RBP14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 CAPSQ13938 189 aa14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 ILDR2Q71H61 639 aa14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 LRRC49Q8IUZ0 686 aa14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 SHC3Q92529 594 aa14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 WNT8BQ93098 351 aa14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 LENG9Q96B70 501 aa14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 RNF208Q9H0X6 261 aa14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 ZBTB39O15060 712 aa14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 ITIH4Q14624 930 aa14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 STRA8Q7Z7C7 330 aa14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 TMA16Q96EY4 203 aaKnown RBP14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.84□□□□□ -0.033e-6■■■■□ 23.5
PPARGC1B-203ENST00000394320 NCKIPSDQ9NZQ3 722 aa14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 DMGDHQ9UI17 866 aaKnown RBP14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 SKOR1P84550 965 aa14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 ZACNQ401N2 412 aa14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 WDR59Q6PJI9 974 aa14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 IARS2Q9NSE4 1012 aaKnown RBP14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 AURKCQ9UQB9 309 aa14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 TIMM13Q9Y5L4 95 aaPredicted RBP14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 PLIN4Q96Q06 1357 aa14.84□□□□□ -0.03
PPARGC1B-203ENST00000394320 O00370 1275 aa14.83□□□□□ -0.03
PPARGC1B-203ENST00000394320 SUPT7LO94864 414 aa14.83□□□□□ -0.03
PPARGC1B-203ENST00000394320 CKBP12277 381 aa14.83□□□□□ -0.03
PPARGC1B-203ENST00000394320 GP5P40197 560 aa14.83□□□□□ -0.03
PPARGC1B-203ENST00000394320 GRM5P41594 1212 aa14.83□□□□□ -0.03
PPARGC1B-203ENST00000394320 PPP3CCP48454 512 aa14.83□□□□□ -0.03
PPARGC1B-203ENST00000394320 TUBP50607 506 aa14.83□□□□□ -0.03
PPARGC1B-203ENST00000394320 MKRN4PQ13434 485 aaPredicted RBP14.83□□□□□ -0.03
PPARGC1B-203ENST00000394320 SPANXN3Q5MJ09 141 aa14.83□□□□□ -0.03
PPARGC1B-203ENST00000394320 PPTC7Q8NI37 304 aa14.83□□□□□ -0.03
PPARGC1B-203ENST00000394320 UTP6Q9NYH9 597 aaKnown RBP14.83□□□□□ -0.03
PPARGC1B-203ENST00000394320 BLOC1S6Q9UL45 172 aa14.83□□□□□ -0.03
PPARGC1B-203ENST00000394320 GIT1Q9Y2X7 761 aa14.83□□□□□ -0.03
PPARGC1B-203ENST00000394320 PTCH2Q9Y6C5 1203 aa14.83□□□□□ -0.03
PPARGC1B-203ENST00000394320 C16orf96A6NNT2 1141 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 CBX4O00257 560 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 MIPP30301 263 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 CCDC149Q6ZUS6 474 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 LONP2Q86WA8 852 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 CXorf38Q8TB03 319 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 ZCCHC2Q9C0B9 1178 aaKnown RBP14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 FAM95CA0A1B0GW59 222 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 SPATA31C1P0DKV0 1188 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 MYL4P12829 197 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 COPAP53621 1224 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 MARSP56192 900 aaKnown RBP14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 DEFB115Q30KQ5 88 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 DUSP28Q4G0W2 176 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 ZNF333Q96JL9 665 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 SOX13Q9UN79 622 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 HNRNPCL2B2RXH8 293 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 THRAP10827 490 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 PGAM1P18669 254 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 KLRC2P26717 231 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 PEX19P40855 299 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 CD151P48509 253 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 CDH8P55286 799 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 BEX3Q00994 111 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 MFSD7Q6UXD7 560 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 PTF1AQ7RTS3 328 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 EPS8L3Q8TE67 593 aaKnown RBP14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 EDEM1Q92611 657 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 TNFRSF25Q93038 417 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 ATP13A1Q9HD20 1204 aa14.83□□□□□ -0.04
PPARGC1B-203ENST00000394320 SF3B1O75533 1304 aaKnown RBP eCLIP14.83□□□□□ -0.043e-6■■■■■ 87.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms