RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 PPP2R3BQ9Y5P8 575 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 MAD1L1Q9Y6D9 718 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 TRIP11Q15643 1979 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 CCDC189A1A4V9 331 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 ZNF487B1APH4 448 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 H3BRJ5 948 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 BIRC5O15392 142 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 GCATO75600 419 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 BPGMP07738 259 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 CCNHP51946 323 aaPredicted RBP19.51■□□□□ 0.71
CBX1-202ENST00000393408 RBP5P82980 135 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 SLC6A3Q01959 620 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 POU5F1BQ06416 359 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 THOC5Q13769 683 aaKnown RBP19.51■□□□□ 0.71
CBX1-202ENST00000393408 PKDCCQ504Y2 493 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 SCG3Q8WXD2 468 aaKnown RBP19.51■□□□□ 0.71
CBX1-202ENST00000393408 CNKSR2Q8WXI2 1034 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 MPHOSPH6Q99547 160 aaKnown RBP19.51■□□□□ 0.71
CBX1-202ENST00000393408 SLC4A5Q9BY07 1137 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 SLC24A3Q9HC58 644 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 LRCH1Q9Y2L9 728 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 A0A087WZ62 844 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 CYP2F1P24903 491 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 AQP5P55064 265 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 HDAC4P56524 1084 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 LBRQ14739 615 aaKnown RBP19.5■□□□□ 0.71
CBX1-202ENST00000393408 STILQ15468 1287 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 PPP6R3Q5H9R7 873 aaPredicted RBP19.5■□□□□ 0.71
CBX1-202ENST00000393408 PPP1R26Q5T8A7 1209 aaPredicted RBP19.5■□□□□ 0.71
CBX1-202ENST00000393408 MROH9Q5TGP6 573 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 TTC30AQ86WT1 665 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 CRLF3Q8IUI8 442 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 FBXO16Q8IX29 292 aaPredicted RBP19.5■□□□□ 0.71
CBX1-202ENST00000393408 RBM15BQ8NDT2 890 aaKnown RBP19.5■□□□□ 0.71
CBX1-202ENST00000393408 DTX3LQ8TDB6 740 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 LBHD1Q9BQE6 289 aaPredicted RBP19.5■□□□□ 0.71
CBX1-202ENST00000393408 FDXACB1Q9BRP7 624 aaPredicted RBP19.5■□□□□ 0.71
CBX1-202ENST00000393408 C20orf27Q9GZN8 174 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 RNPEPQ9H4A4 650 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 DPP3Q9NY33 737 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 HBS1LQ9Y450 684 aaKnown RBP19.5■□□□□ 0.71
CBX1-202ENST00000393408 PCDHA11Q9Y5I1 949 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 CNMDO75829 334 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 AMPD1P23109 780 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 SERPINB9P50453 376 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 AP1B1Q10567 949 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 IRGCQ6NXR0 463 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 IFNLR1Q8IU57 520 aaPredicted RBP19.5■□□□□ 0.71
CBX1-202ENST00000393408 STKLD1Q8NE28 680 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 FAM161BQ96MY7 647 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 MARCOQ9UEW3 520 aaPredicted RBP19.5■□□□□ 0.71
CBX1-202ENST00000393408 TAGLN3Q9UI15 199 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 PLA2G4CQ9UP65 541 aa19.5■□□□□ 0.71
CBX1-202ENST00000393408 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.5■□□□□ 0.71
CBX1-202ENST00000393408 CITO14578 2027 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 KITP10721 976 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 ARF4P18085 180 aaPredicted RBP19.49■□□□□ 0.71
CBX1-202ENST00000393408 TUBP50607 506 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 IGBP1P78318 339 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 GBE1Q04446 702 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 SLC10A2Q12908 348 aaPredicted RBP19.49■□□□□ 0.71
CBX1-202ENST00000393408 TIFABQ6ZNK6 161 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 TMEM110Q86TL2 294 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 PPP1R16BQ96T49 567 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 SYT15Q9BQS2 421 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 CCDC106Q9BWC9 280 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 ZNF212Q9UDV6 495 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 C2CD2Q9Y426 696 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 POLR2AP24928 1970 aaKnown RBP19.49■□□□□ 0.71
CBX1-202ENST00000393408 F8W8V4 182 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 GABBR2O75899 941 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 UPP2O95045 317 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 MDH1BQ5I0G3 518 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 GADL1Q6ZQY3 521 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 SCUBE3Q8IX30 993 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 ADGRF2Q8IZF7 708 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 AFG1LQ8WV93 481 aa19.49■□□□□ 0.71
CBX1-202ENST00000393408 XAB2Q9HCS7 855 aaKnown RBP19.49■□□□□ 0.71
CBX1-202ENST00000393408 PLXNA1Q9UIW2 1896 aa19.48■□□□□ 0.71
CBX1-202ENST00000393408 PAPPA2Q9BXP8 1791 aa19.48■□□□□ 0.71
CBX1-202ENST00000393408 PAPSS1O43252 624 aaPredicted RBP19.48■□□□□ 0.71
CBX1-202ENST00000393408 ATP5BP06576 529 aaKnown RBP19.48■□□□□ 0.71
CBX1-202ENST00000393408 SKIP12755 728 aa19.48■□□□□ 0.71
CBX1-202ENST00000393408 TFE3P19532 575 aaPredicted RBP19.48■□□□□ 0.71
CBX1-202ENST00000393408 L1CAMP32004 1257 aa19.48■□□□□ 0.71
CBX1-202ENST00000393408 GRIA1P42261 906 aa19.48■□□□□ 0.71
CBX1-202ENST00000393408 STX3Q13277 289 aa19.48■□□□□ 0.71
CBX1-202ENST00000393408 KYAT1Q16773 422 aa19.48■□□□□ 0.71
CBX1-202ENST00000393408 ARCQ7LC44 396 aa19.48■□□□□ 0.71
CBX1-202ENST00000393408 DEPDC1BQ8WUY9 529 aa19.48■□□□□ 0.71
CBX1-202ENST00000393408 MOCS1Q9NZB8 636 aa19.48■□□□□ 0.71
CBX1-202ENST00000393408 SRCAPQ6ZRS2 3230 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 TOP3BO95985 862 aaKnown RBP19.47■□□□□ 0.71
CBX1-202ENST00000393408 SETSIPP0DME0 302 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 WASHC5Q12768 1159 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 RCN2Q14257 317 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 DPYSL2Q16555 572 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 TMEM154Q6P9G4 183 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 NET1Q7Z628 596 aaPredicted RBP19.47■□□□□ 0.71
CBX1-202ENST00000393408 SESTD1Q86VW0 696 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms