RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 RMDN2Q96LZ7 410 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 RNF157Q96PX1 679 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 PDLIM7Q9NR12 457 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 PPME1Q9Y570 386 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 RRN3P2A6NIE6 340 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 SPDYE5A6NIY4 337 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 TRPA1O75762 1119 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 SMNDC1O75940 238 aaKnown RBP eCLIP10.89□□□□□ -0.67
CALD1-203ENST00000393118 ETS2P15036 469 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 PPIL2Q13356 520 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 CHADLQ6NUI6 762 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 MTHFD1LQ6UB35 978 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 NDRG1Q92597 394 aaKnown RBP10.89□□□□□ -0.67
CALD1-203ENST00000393118 E2F7Q96AV8 911 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 CCDC124Q96CT7 223 aaKnown RBP10.89□□□□□ -0.67
CALD1-203ENST00000393118 FRMD8P1Q9BZ68 369 aaPredicted RBP10.89□□□□□ -0.67
CALD1-203ENST00000393118 NXF3Q9H4D5 531 aaKnown RBP10.89□□□□□ -0.67
CALD1-203ENST00000393118 PDZD7Q9H5P4 517 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 DDIT4Q9NX09 232 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 TUBGCP4Q9UGJ1 667 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 STYXL1Q9Y6J8 313 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 UBR3Q6ZT12 1888 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 DFFAO00273 331 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 USP12O75317 370 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 SPAG6O75602 509 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 STBD1O95210 358 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 HSPA4LO95757 839 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 MYL2P10916 166 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 TAC1P20366 129 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 BEX3Q00994 111 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 STX3Q13277 289 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 BLMHQ13867 455 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 EFHC1Q5JVL4 640 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 RNASEH2BQ5TBB1 312 aaKnown RBP10.89□□□□□ -0.67
CALD1-203ENST00000393118 DEFB106AQ8N104 65 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 HASPINQ8TF76 798 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 NKD2Q969F2 451 aaPredicted RBP10.89□□□□□ -0.67
CALD1-203ENST00000393118 NMD3Q96D46 503 aaKnown RBP10.89□□□□□ -0.67
CALD1-203ENST00000393118 ZNF317Q96PQ6 595 aaPredicted RBP10.89□□□□□ -0.67
CALD1-203ENST00000393118 FZD8Q9H461 694 aa10.89□□□□□ -0.67
CALD1-203ENST00000393118 FNDC3AQ9Y2H6 1198 aaKnown RBP10.89□□□□□ -0.67
CALD1-203ENST00000393118 SMAPO00193 183 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 CYB561D2O14569 222 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 SLC4A1P02730 911 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 SERPINB6P35237 376 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 GNASQ5JWF2 1037 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 PMF1Q6P1K2 205 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 ZCCHC23Q6ZST2 131 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 PLEKHH3Q7Z736 793 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 MAB21L3Q8N8X9 362 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 ZNF669Q96BR6 464 aaPredicted RBP10.88□□□□□ -0.67
CALD1-203ENST00000393118 PARK7Q99497 189 aaKnown RBP10.88□□□□□ -0.67
CALD1-203ENST00000393118 EPB41L4BQ9H329 900 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 R3HDMLQ9H3Y0 253 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 UBP1Q9NZI7 540 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 SLC17A7Q9P2U7 560 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 PCDHGC3Q9UN70 934 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 APOBEC2Q9Y235 224 aaKnown RBP10.88□□□□□ -0.67
CALD1-203ENST00000393118 NR2E3Q9Y5X4 410 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 RPS6KL1Q9Y6S9 549 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 IQCA1LA6NCM1 817 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 SPECC1L-ADORA2AF8WAN1 911 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 TNPO2O14787 897 aaKnown RBP10.88□□□□□ -0.67
CALD1-203ENST00000393118 FAM155BO75949 473 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 CELF2O95319 508 aaKnown RBP10.88□□□□□ -0.67
CALD1-203ENST00000393118 ABHD2P08910 425 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 BST2Q10589 180 aaKnown RBP10.88□□□□□ -0.67
CALD1-203ENST00000393118 ACVR2BQ13705 512 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 SV2CQ496J9 727 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 ARHGAP18Q8N392 663 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 FITM2Q8N6M3 262 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 LHX5Q9H2C1 402 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 PLEKHA5Q9HAU0 1116 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 VTA1Q9NP79 307 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 ARMCX1Q9P291 453 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 TCRBV7S3A2A0A539 114 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 TCRBV9S1A1TA0A576 114 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 KPNA7A9QM74 516 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 ATG7O95352 703 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 EPHB2P29323 1055 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 TARBP2Q15633 366 aaKnown RBP10.88□□□□□ -0.67
CALD1-203ENST00000393118 LCA5Q86VQ0 697 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 RNF139Q8WU17 664 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 EDEM1Q92611 657 aa10.88□□□□□ -0.67
CALD1-203ENST00000393118 SRPK1Q96SB4 655 aaKnown RBP10.88□□□□□ -0.67
CALD1-203ENST00000393118 ATXN2Q99700 1313 aaKnown RBP10.87□□□□□ -0.67
CALD1-203ENST00000393118 MGRN1O60291 552 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 STAMBPO95630 424 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 MYCP01106 439 aaPredicted RBP10.87□□□□□ -0.67
CALD1-203ENST00000393118 FESP07332 822 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 KRT16P08779 473 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 FOXN2P32314 431 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 PGM1P36871 562 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 ACADSBP45954 432 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 ATXN1P54253 815 aaKnown RBP10.87□□□□□ -0.67
CALD1-203ENST00000393118 MPP2Q14168 576 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 TCEAL1Q15170 157 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 AGGF1Q8N302 714 aaeCLIP10.87□□□□□ -0.677e-7■■■□□ 15.8
CALD1-203ENST00000393118 SLCO2A1Q92959 643 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 LENG1Q96BZ8 264 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms