RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 ALKAL1Q6UXT8 129 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 CDHR3Q6ZTQ4 885 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 USP50Q70EL3 339 aaPredicted RBP12.74□□□□□ -0.37
RFC5-201ENST00000392542 ZC3H15Q8WU90 426 aaKnown RBP12.74□□□□□ -0.37
RFC5-201ENST00000392542 EBNA1BP2Q99848 306 aaKnown RBP12.74□□□□□ -0.37
RFC5-201ENST00000392542 TMEM120AQ9BXJ8 343 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 FAM49AQ9H0Q0 323 aaPredicted RBP12.74□□□□□ -0.37
RFC5-201ENST00000392542 TLE6Q9H808 572 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 KCNK13Q9HB14 408 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 MKS1Q9NXB0 559 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 HEY2Q9UBP5 337 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 GTF2IRD1Q9UHL9 959 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 UBQLN1Q9UMX0 589 aaKnown RBP12.74□□□□□ -0.37
RFC5-201ENST00000392542 HES2Q9Y543 173 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 STRNO43815 780 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 DNAJC6O75061 913 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 GPR32O75388 356 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 RFPL1O75677 317 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 HAUS5O94927 633 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 LCP1P13796 627 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 EPHB2P29323 1055 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 CDK16Q00536 496 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 DGKDQ16760 1214 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 KCNT2Q6UVM3 1135 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 CRYBG2Q8N1P7 616 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 FAM13CQ8NE31 585 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 GSDMBQ8TAX9 411 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 NSMCE1Q8WV22 266 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 KBTBD7Q8WVZ9 684 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 N4BP2L2Q92802 583 aaPredicted RBP12.74□□□□□ -0.37
RFC5-201ENST00000392542 SKA1Q96BD8 255 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 MTBPQ96DY7 904 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 CSPG4P5Q96PW8 444 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 TUBB6Q9BUF5 446 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 MAGEB5Q9BZ81 275 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 XAB2Q9HCS7 855 aaKnown RBP12.74□□□□□ -0.37
RFC5-201ENST00000392542 GJD2Q9UKL4 321 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 PLLPQ9Y342 182 aa12.74□□□□□ -0.37
RFC5-201ENST00000392542 FAM159BA6NKW6 160 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 PDHXO00330 501 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 UGT1A9O60656 530 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 KRT38O76015 456 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 RECQL4O94761 1208 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 PDGFRBP09619 1106 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 CSH1P0DML2 217 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 CSH2P0DML3 217 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 ACADSBP45954 432 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 CDC42EP1Q00587 391 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 SEMA5AQ13591 1074 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 NCBP2-AS2Q69YL0 99 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 HEATR6Q6AI08 1181 aaKnown RBP12.73□□□□□ -0.37
RFC5-201ENST00000392542 TRIM42Q8IWZ5 723 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 MPP5Q8N3R9 675 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 CCDC185Q8N715 623 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 NXF3Q9H4D5 531 aaKnown RBP12.73□□□□□ -0.37
RFC5-201ENST00000392542 UGT1A7Q9HAW7 530 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 UGT1A10Q9HAW8 530 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 UGT1A8Q9HAW9 530 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 CDHR5Q9HBB8 845 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 PCDHA11Q9Y5I1 949 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 MAD1L1Q9Y6D9 718 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 DCAF8L1A6NGE4 600 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 PIRO00625 290 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 DIAPH2O60879 1101 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 DLDP09622 509 aaKnown RBP12.73□□□□□ -0.37
RFC5-201ENST00000392542 GNL1P36915 607 aaPredicted RBP12.73□□□□□ -0.37
RFC5-201ENST00000392542 BMPR2Q13873 1038 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 FBXO47Q5MNV8 452 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 WASHC2DQ5SRD0 308 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 STRADAQ7RTN6 431 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 SLC10A4Q96EP9 437 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 RSRC1Q96IZ7 334 aaKnown RBP12.73□□□□□ -0.37
RFC5-201ENST00000392542 HSFY1Q96LI6 401 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 OSMRQ99650 979 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 TRIM6Q9C030 488 aaPredicted RBP12.73□□□□□ -0.37
RFC5-201ENST00000392542 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.73□□□□□ -0.37
RFC5-201ENST00000392542 DTLQ9NZJ0 730 aa12.73□□□□□ -0.37
RFC5-201ENST00000392542 RPL26L1Q9UNX3 145 aaKnown RBP12.73□□□□□ -0.37
RFC5-201ENST00000392542 HACD1B0YJ81 288 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 PEX11AO75192 247 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 CD4P01730 458 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 RPSAP08865 295 aaKnown RBP12.72□□□□□ -0.37
RFC5-201ENST00000392542 AMPD1P23109 780 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 SERPINB9P50453 376 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 MRPS5P82675 430 aaKnown RBP12.72□□□□□ -0.37
RFC5-201ENST00000392542 PCBP1Q15365 356 aaKnown RBP eCLIP12.72□□□□□ -0.37
RFC5-201ENST00000392542 TRMT10BQ6PF06 316 aaKnown RBP12.72□□□□□ -0.37
RFC5-201ENST00000392542 DPP9Q86TI2 863 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 PTCD3Q96EY7 689 aaKnown RBP12.72□□□□□ -0.37
RFC5-201ENST00000392542 MAML3Q96JK9 1138 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 ZNF560Q96MR9 790 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 APOL6Q9BWW8 343 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 SNX25Q9H3E2 840 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 RNPEPL1Q9HAU8 725 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 RNF19AQ9NV58 838 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 MORF4L1Q9UBU8 362 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 USP3Q9Y6I4 520 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 I3L4J1 428 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 DGKIO75912 1065 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 DARSP14868 501 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms