RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 TRIM60Q495X7 471 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 SLC39A12Q504Y0 691 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 VARS2Q5ST30 1063 aaKnown RBP22.17■■□□□ 1.14
SPHK1-202ENST00000392496 DARS2Q6PI48 645 aaKnown RBP22.17■■□□□ 1.14
SPHK1-202ENST00000392496 RELL1Q8IUW5 271 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 ZCCHC9Q8N567 271 aaKnown RBP22.17■■□□□ 1.14
SPHK1-202ENST00000392496 FUBP3Q96I24 572 aaKnown RBP eCLIP22.17■■□□□ 1.14
SPHK1-202ENST00000392496 PPP1R12CQ9BZL4 782 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 PIGVQ9NUD9 493 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 CWC15Q9P013 229 aaKnown RBP22.17■■□□□ 1.14
SPHK1-202ENST00000392496 CFAP69A5D8W1 941 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 F9P00740 461 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 NR2C2P49116 596 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 SLC11A1P49279 550 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 IFFO1Q0D2I5 559 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 NME3Q13232 169 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 RNASEH2BQ5TBB1 312 aaKnown RBP22.17■■□□□ 1.14
SPHK1-202ENST00000392496 FAM76AQ8TAV0 307 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 EXOC4Q96A65 974 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 ATP6V1G3Q96LB4 118 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 CDC42EP4Q9H3Q1 356 aaKnown RBP22.17■■□□□ 1.14
SPHK1-202ENST00000392496 C10orf88Q9H8K7 445 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 MARCH5Q9NX47 278 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 SHOC2Q9UQ13 582 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 VWA8A3KMH1 1905 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 HMGB1P1B2RPK0 211 aaPredicted RBP22.16■■□□□ 1.14
SPHK1-202ENST00000392496 H7C0C1 242 aa22.16■■□□□ 1.14
SPHK1-202ENST00000392496 TNFRSF10BO14763 440 aa22.16■■□□□ 1.14
SPHK1-202ENST00000392496 OR4Q2P0C623 313 aa22.16■■□□□ 1.14
SPHK1-202ENST00000392496 RPL22P35268 128 aaKnown RBP22.16■■□□□ 1.14
SPHK1-202ENST00000392496 GRIK1P39086 918 aa22.16■■□□□ 1.14
SPHK1-202ENST00000392496 ATP5OP48047 213 aa22.16■■□□□ 1.14
SPHK1-202ENST00000392496 SCAPQ12770 1279 aa22.16■■□□□ 1.14
SPHK1-202ENST00000392496 ELAVL2Q12926 359 aaKnown RBP22.16■■□□□ 1.14
SPHK1-202ENST00000392496 SLC29A2Q14542 456 aa22.16■■□□□ 1.14
SPHK1-202ENST00000392496 EFHC2Q5JST6 749 aa22.16■■□□□ 1.14
SPHK1-202ENST00000392496 FAM171A1Q5VUB5 890 aa22.16■■□□□ 1.14
SPHK1-202ENST00000392496 NECAB2Q7Z6G3 386 aa22.16■■□□□ 1.14
SPHK1-202ENST00000392496 ZC3H18Q86VM9 953 aaKnown RBP22.16■■□□□ 1.14
SPHK1-202ENST00000392496 MAGEB5Q9BZ81 275 aa22.16■■□□□ 1.14
SPHK1-202ENST00000392496 WDR6Q9NNW5 1121 aaKnown RBP22.16■■□□□ 1.14
SPHK1-202ENST00000392496 FNDC1Q4ZHG4 1894 aaPredicted RBP22.16■■□□□ 1.14
SPHK1-202ENST00000392496 SF3B1O75533 1304 aaKnown RBP eCLIP22.15■■□□□ 1.14
SPHK1-202ENST00000392496 SYNJ2BP-COX16A0A087WUM0 186 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 BCLAF3A2AJT9 711 aaKnown RBP22.15■■□□□ 1.14
SPHK1-202ENST00000392496 OR6C75A6NL08 312 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 TBKBP1A7MCY6 615 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 H3BRJ5 948 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 FGFR3P22607 806 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 CYP2C18P33260 490 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 XRCC4Q13426 336 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 BSPRYQ5W0U4 402 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 ZNF280DQ6N043 979 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 VSTM1Q6UX27 236 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 CROCCP2Q86T23 111 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 PYROXD2Q8N2H3 581 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 FAM71DQ8N9W8 422 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 COX16Q9P0S2 106 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 TBX21Q9UL17 535 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 HEY1Q9Y5J3 304 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 MICAL3Q7RTP6 2002 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 CCDC85CA6NKD9 419 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 SMAPO00193 183 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 GALTP07902 379 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 GOT1P17174 413 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 ADRA1BP35368 520 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 SLC5A3P53794 718 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 CTXN3Q4LDR2 81 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 AGBL2Q5U5Z8 902 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 HOOK3Q86VS8 718 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 RTP4Q96DX8 246 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 TMEM109Q9BVC6 243 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 GPR62Q9BZJ7 368 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 C11orf49Q9H6J7 331 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 PSD3Q9NYI0 1048 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 FBXW11Q9UKB1 542 aa22.15■■□□□ 1.14
SPHK1-202ENST00000392496 FARP1Q9Y4F1 1045 aaPredicted RBP22.15■■□□□ 1.14
SPHK1-202ENST00000392496 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.14■■□□□ 1.13
SPHK1-202ENST00000392496 KRT71Q3SY84 523 aa22.14■■□□□ 1.13
SPHK1-202ENST00000392496 FUT10Q6P4F1 479 aa22.14■■□□□ 1.13
SPHK1-202ENST00000392496 DEFB128Q7Z7B8 93 aa22.14■■□□□ 1.13
SPHK1-202ENST00000392496 CDKL3Q8IVW4 592 aaPredicted RBP22.14■■□□□ 1.13
SPHK1-202ENST00000392496 PPIL6Q8IXY8 311 aa22.14■■□□□ 1.13
SPHK1-202ENST00000392496 LRRC43Q8N309 656 aa22.14■■□□□ 1.13
SPHK1-202ENST00000392496 RNF139Q8WU17 664 aa22.14■■□□□ 1.13
SPHK1-202ENST00000392496 C8orf48Q96LL4 319 aa22.14■■□□□ 1.13
SPHK1-202ENST00000392496 USP29Q9HBJ7 922 aa22.14■■□□□ 1.13
SPHK1-202ENST00000392496 DDIT4Q9NX09 232 aa22.14■■□□□ 1.13
SPHK1-202ENST00000392496 ABI2Q9NYB9 513 aaPredicted RBP22.14■■□□□ 1.13
SPHK1-202ENST00000392496 PCDHB5Q9Y5E4 795 aa22.14■■□□□ 1.13
SPHK1-202ENST00000392496 TTC4O95801 387 aa22.13■■□□□ 1.13
SPHK1-202ENST00000392496 AMPD1P23109 780 aa22.13■■□□□ 1.13
SPHK1-202ENST00000392496 MAGEA11P43364 429 aa22.13■■□□□ 1.13
SPHK1-202ENST00000392496 ARL13BQ3SXY8 428 aa22.13■■□□□ 1.13
SPHK1-202ENST00000392496 NCBP2-AS2Q69YL0 99 aa22.13■■□□□ 1.13
SPHK1-202ENST00000392496 CEP57Q86XR8 500 aa22.13■■□□□ 1.13
SPHK1-202ENST00000392496 SCAMP5Q8TAC9 235 aa22.13■■□□□ 1.13
SPHK1-202ENST00000392496 ADAM32Q8TC27 787 aa22.13■■□□□ 1.13
SPHK1-202ENST00000392496 EDEM1Q92611 657 aa22.13■■□□□ 1.13
SPHK1-202ENST00000392496 PRCCQ92733 491 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms