RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 MAGEA11P43364 429 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 GDF10P55107 478 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 ROR1Q01973 937 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 GABPB1Q06547 395 aaPredicted RBP11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 GPS1Q13098 491 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 NME3Q13232 169 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 BSPRYQ5W0U4 402 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 C8orf48Q96LL4 319 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 TMEM39AQ9NV64 488 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 ABI2Q9NYB9 513 aaPredicted RBP11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 CWC15Q9P013 229 aaKnown RBP11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 VPS18Q9P253 973 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 TPX2Q9ULW0 747 aaKnown RBP11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 ZNF638Q14966 1978 aaKnown RBP11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 TRIM66O15016 1216 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 IFNB1P01574 187 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 ARL4AP40617 200 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 NR2C2P49116 596 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 EIF3BP55884 814 aaKnown RBP11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 MORF4L2Q15014 288 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 EFHC2Q5JST6 749 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 C1orf228Q6PIY5 440 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 CEP128Q6ZU80 1094 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 TRMT10CQ7L0Y3 403 aaKnown RBP11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 PCGF5Q86SE9 256 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 CEP57Q86XR8 500 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 UNC45BQ8IWX7 931 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 SCAMP5Q8TAC9 235 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 VWCEQ96DN2 955 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 OXCT2Q9BYC2 517 aaPredicted RBP11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 MAGEB5Q9BZ81 275 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 PCDHB5Q9Y5E4 795 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 COL4A6Q14031 1691 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 SYNJ2BP-COX16A0A087WUM0 186 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 CFAP69A5D8W1 941 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 TBC1D4O60343 1298 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 ADRA1BP35368 520 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 CHKAP35790 457 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 ZNF844Q08AG5 666 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 XRCC4Q13426 336 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 PKN2Q16513 984 aaKnown RBP11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 CEP85LQ5SZL2 805 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 RNASEH2BQ5TBB1 312 aaKnown RBP11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 DARS2Q6PI48 645 aaKnown RBP11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 ZC3H18Q86VM9 953 aaKnown RBP11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 RELL1Q8IUW5 271 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 PYROXD2Q8N2H3 581 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 ZCCHC9Q8N567 271 aaKnown RBP11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 ADAM32Q8TC27 787 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 EDEM1Q92611 657 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 RTP4Q96DX8 246 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 SEMA4AQ9H3S1 761 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 C11orf49Q9H6J7 331 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 C10orf88Q9H8K7 445 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 FAM204AQ9H8W3 233 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 DDIT4Q9NX09 232 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 COX16Q9P0S2 106 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 FBXW11Q9UKB1 542 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 SHOC2Q9UQ13 582 aa11.88□□□□□ -0.51
SMARCAL1-203ENST00000392128 MKI67P46013 3256 aaKnown RBP11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 BCLAF3A2AJT9 711 aaKnown RBP11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 H3BRJ5 948 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 H7C4K7 107 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 RIPK2O43353 540 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 DGKIO75912 1065 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 IGLV3-25P01717 112 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 GOT1P17174 413 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 CXCR3P49682 368 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 SMARCB1Q12824 385 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 TTMPQ5BVD1 217 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 DENND2CQ68D51 928 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 CCDC25Q86WR0 208 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 FAM71DQ8N9W8 422 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 RNF139Q8WU17 664 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 ABCC13Q9NSE7 274 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 FARP1Q9Y4F1 1045 aaPredicted RBP11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 HEY1Q9Y5J3 304 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 GOLGA6L10A6NI86 522 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 H7C0C1 242 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 EFEMP2O95967 443 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 RPL22P35268 128 aaKnown RBP11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 ATP5OP48047 213 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 YWHAGP61981 247 aaKnown RBP eCLIP11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 ARL13BQ3SXY8 428 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 NCBP2-AS2Q69YL0 99 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 ANKS3Q6ZW76 656 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 TAC4Q86UU9 113 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 TMEM173Q86WV6 379 aaPredicted RBP11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 SCN4BQ8IWT1 228 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 OR2W6PQ8NHA6 318 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 DQX1Q8TE96 717 aaKnown RBP11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 ARL8AQ96BM9 186 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 B3GALT6Q96L58 329 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 CDC42EP4Q9H3Q1 356 aaKnown RBP11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 USP29Q9HBJ7 922 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 TMBIM4Q9HC24 238 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 ARHGEF4Q9NR80 690 aa11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.87□□□□□ -0.51
SMARCAL1-203ENST00000392128 GREB1Q4ZG55 1949 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms