RNA–Protein interactions for RNA: ENST00000390601.3

IGHV3-11-201, Transcript of immunoglobulin heavy variable 3-11 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene IGHV3-11, Length 473 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-11-201ENST00000390601 STC2O76061 302 aa13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 TRIM16O95361 564 aa13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 CISD3P0C7P0 127 aa13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 EPB41P11171 864 aaKnown RBP13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 WASP42768 502 aa13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 MCCD1P59942 119 aaPredicted RBP13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 PPP3CAQ08209 521 aa13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 SEMA3BQ13214 749 aa13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 SLC14A1Q13336 389 aa13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 KRBA2Q6ZNG9 492 aa13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 RSRC2Q7L4I2 434 aaKnown RBP13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 GPRIN1Q7Z2K8 1008 aa13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 MIB1Q86YT6 1006 aa13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 FBXL13Q8NEE6 735 aa13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 TMEM176AQ96HP8 235 aa13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 ZNF419Q96HQ0 510 aaPredicted RBP13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 MRGPRX1Q96LB2 322 aa13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 GTPBP2Q9BX10 602 aaKnown RBP13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 SLC2A11Q9BYW1 496 aa13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 ADAM33Q9BZ11 813 aa13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 NMUR1Q9HB89 426 aa13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 APOBEC3GQ9HC16 384 aaKnown RBP13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 CAPN10Q9HC96 672 aa13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 MAP1BP46821 2468 aaKnown RBP13.21□□□□□ -0.29
IGHV3-11-201ENST00000390601 PLXND1Q9Y4D7 1925 aa13.21□□□□□ -0.3
IGHV3-11-201ENST00000390601 TRIM24O15164 1050 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 CETN3O15182 167 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 SYNCRIPO60506 623 aaKnown RBP13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 PENKP01210 267 aaPredicted RBP13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 TRIM49P0CI25 452 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 TRIM49CP0CI26 452 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 NDUFV2P19404 249 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 OXTRP30559 389 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 MXI1P50539 228 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 NDUFA8P51970 172 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 ZNF445P59923 1031 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 YWHAEP62258 255 aaKnown RBP13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 DPYDQ12882 1025 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 PKP1Q13835 747 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 PPP1R26Q5T8A7 1209 aaPredicted RBP13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 SCD5Q86SK9 330 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 RGL4Q8IZJ4 473 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 TRIML1Q8N9V2 468 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 KDF1Q8NAX2 398 aaPredicted RBP13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 SPRYD3Q8NCJ5 442 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 HSPA12BQ96MM6 686 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 ACOX2Q99424 681 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 ZDHHC5Q9C0B5 715 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 MMRN2Q9H8L6 949 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 OLA1Q9NTK5 396 aaKnown RBP13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 RAB20Q9NX57 234 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 RASAL2Q9UJF2 1139 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 NUDT5Q9UKK9 219 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 HCN2Q9UL51 889 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 CYP8B1Q9UNU6 501 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 MAPK8IP1Q9UQF2 711 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 NFE2L3Q9Y4A8 694 aa13.2□□□□□ -0.3
IGHV3-11-201ENST00000390601 KMT2BQ9UMN6 2715 aaPredicted RBP13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 ATXN2Q99700 1313 aaKnown RBP13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 GON4LQ3T8J9 2241 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 CHD8Q9HCK8 2581 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 MDM4O15151 490 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 CD6P30203 668 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 EFEMP1Q12805 493 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 EIF4HQ15056 248 aaKnown RBP13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 ZNF394Q53GI3 561 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 ARHGAP17Q68EM7 881 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 KIAA1211LQ6NV74 962 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 KIAA1324Q6UXG2 1013 aaKnown RBP13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 TOGARAM2Q6ZUX3 1019 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 ANKS1BQ7Z6G8 1248 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 PIP4P1Q86T03 277 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 CPXM2Q8N436 756 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 DEFB119Q8N690 84 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 ANKRD52Q8NB46 1076 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 CADM4Q8NFZ8 388 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 GTPBP4Q9BZE4 634 aaKnown RBP13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 PRDM16Q9HAZ2 1276 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 CD248Q9HCU0 757 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 CISHQ9NSE2 258 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 DNAAF2Q9NVR5 837 aaKnown RBP13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 RMND1Q9NWS8 449 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 CACNA2D2Q9NY47 1150 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 PLK2Q9NYY3 685 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 MARCH2Q9P0N8 246 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 WASF3Q9UPY6 502 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 NEUROG3Q9Y4Z2 214 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 STON1Q9Y6Q2 735 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 PI4KAP42356 2102 aa13.19□□□□□ -0.3
IGHV3-11-201ENST00000390601 ZNF202O95125 648 aa13.18□□□□□ -0.3
IGHV3-11-201ENST00000390601 CORO1AP31146 461 aaKnown RBP13.18□□□□□ -0.3
IGHV3-11-201ENST00000390601 HARS2P49590 506 aaKnown RBP13.18□□□□□ -0.3
IGHV3-11-201ENST00000390601 MFAP3P55082 362 aa13.18□□□□□ -0.3
IGHV3-11-201ENST00000390601 YWHAGP61981 247 aaKnown RBP eCLIP13.18□□□□□ -0.3
IGHV3-11-201ENST00000390601 SIM1P81133 766 aaPredicted RBP13.18□□□□□ -0.3
IGHV3-11-201ENST00000390601 ARID5AQ03989 594 aa13.18□□□□□ -0.3
IGHV3-11-201ENST00000390601 ZNF423Q2M1K9 1284 aa13.18□□□□□ -0.3
IGHV3-11-201ENST00000390601 PLEKHG6Q3KR16 790 aa13.18□□□□□ -0.3
IGHV3-11-201ENST00000390601 RAB41Q5JT25 222 aa13.18□□□□□ -0.3
IGHV3-11-201ENST00000390601 FYB2Q5VWT5 728 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms