RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 MAGEA9P43362 315 aa23.97■■□□□ 1.43
VPS16-201ENST00000380443 PTK7Q13308 1070 aa23.97■■□□□ 1.43
VPS16-201ENST00000380443 DSC3Q14574 896 aa23.97■■□□□ 1.43
VPS16-201ENST00000380443 ITIH4Q14624 930 aa23.97■■□□□ 1.43
VPS16-201ENST00000380443 FAM26DQ5JW98 314 aa23.97■■□□□ 1.43
VPS16-201ENST00000380443 CCDC197Q8NCU1 140 aa23.97■■□□□ 1.43
VPS16-201ENST00000380443 WNT8BQ93098 351 aa23.97■■□□□ 1.43
VPS16-201ENST00000380443 UROC1Q96N76 676 aa23.97■■□□□ 1.43
VPS16-201ENST00000380443 DHRS4Q9BTZ2 278 aa23.97■■□□□ 1.43
VPS16-201ENST00000380443 CRTAC1Q9NQ79 661 aa23.97■■□□□ 1.43
VPS16-201ENST00000380443 RAB6BQ9NRW1 208 aa23.97■■□□□ 1.43
VPS16-201ENST00000380443 PADI3Q9ULW8 664 aa23.97■■□□□ 1.43
VPS16-201ENST00000380443 GOLGA6L7A0A1B0GV03 622 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 H3BRJ5 948 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 GSTA2P09210 222 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 ODC1P11926 461 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 THPOP40225 353 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 CLCNKBP51801 687 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 KCNA10Q16322 511 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 QPCTQ16769 361 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 UPP1Q16831 310 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 BBS9Q3SYG4 887 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 MSS51Q4VC12 460 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 CCSAPQ6IQ19 270 aaPredicted RBP23.96■■□□□ 1.43
VPS16-201ENST00000380443 METTL23Q86XA0 190 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 ANKMY2Q8IV38 441 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 QKIQ96PU8 341 aaKnown RBP eCLIP23.96■■□□□ 1.43
VPS16-201ENST00000380443 FERMT1Q9BQL6 677 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 A0A0U1RQF3 1178 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 TCRBV7S3A2A0A539 114 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 ACAT1P24752 427 aaKnown RBP23.96■■□□□ 1.43
VPS16-201ENST00000380443 ZNF135P52742 658 aaPredicted RBP23.96■■□□□ 1.43
VPS16-201ENST00000380443 DCAF6Q58WW2 860 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 RAB41Q5JT25 222 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 ADGRD1Q6QNK2 874 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 FAM35AQ86V20 835 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 LRRC34Q8IZ02 419 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 MAGEB18Q96M61 343 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 SMC6Q96SB8 1091 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 CYTH2Q99418 400 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 AGO3Q9H9G7 860 aaKnown RBP23.96■■□□□ 1.43
VPS16-201ENST00000380443 PNPLA8Q9NP80 782 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 KRT82Q9NSB4 513 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 ETNK2Q9NVF9 386 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 MIOSQ9NXC5 875 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 USP3Q9Y6I4 520 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 TEX264Q9Y6I9 313 aa23.96■■□□□ 1.43
VPS16-201ENST00000380443 CLDN5O00501 218 aa23.95■■□□□ 1.42
VPS16-201ENST00000380443 CYP11A1P05108 521 aa23.95■■□□□ 1.42
VPS16-201ENST00000380443 VIMP08670 466 aaKnown RBP23.95■■□□□ 1.42
VPS16-201ENST00000380443 KRT15P19012 456 aa23.95■■□□□ 1.42
VPS16-201ENST00000380443 TPSB2P20231 275 aa23.95■■□□□ 1.42
VPS16-201ENST00000380443 TKTL1P51854 596 aa23.95■■□□□ 1.42
VPS16-201ENST00000380443 TPSAB1Q15661 275 aa23.95■■□□□ 1.42
VPS16-201ENST00000380443 CCDC185Q8N715 623 aa23.95■■□□□ 1.42
VPS16-201ENST00000380443 NTAN1Q96AB6 310 aa23.95■■□□□ 1.42
VPS16-201ENST00000380443 ADAM33Q9BZ11 813 aa23.95■■□□□ 1.42
VPS16-201ENST00000380443 TRABDQ9H4I3 376 aa23.95■■□□□ 1.42
VPS16-201ENST00000380443 MEIS3P2A8K0S8 358 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 AP1G2O75843 785 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 CREB1P16220 341 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 STX2P32856 288 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 SCNN1GP51170 649 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 IL9RQ01113 521 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 GRIK3Q13003 919 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 SCML4Q8N228 414 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 IRGQQ8WZA9 623 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 ALKBH8Q96BT7 664 aaKnown RBP23.94■■□□□ 1.42
VPS16-201ENST00000380443 PGAP3Q96FM1 320 aaPredicted RBP23.94■■□□□ 1.42
VPS16-201ENST00000380443 SMARCD1Q96GM5 515 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 ACBD6Q9BR61 282 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 RAD54BQ9Y620 910 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 MSH2P43246 934 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 MAP3K7CLP57077 242 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 DAOAP59103 153 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 IFT88Q13099 833 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 HP1BP3Q5SSJ5 553 aaPredicted RBP23.94■■□□□ 1.42
VPS16-201ENST00000380443 KIAA0319Q5VV43 1072 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 CCDC121Q6ZUS5 278 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 VPS52Q8N1B4 723 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 PPM1EQ8WY54 764 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 LPPQ93052 612 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 OLFM3Q96PB7 478 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 PLCD4Q9BRC7 762 aa23.94■■□□□ 1.42
VPS16-201ENST00000380443 DGKIO75912 1065 aa23.93■■□□□ 1.42
VPS16-201ENST00000380443 BEST1O76090 585 aa23.93■■□□□ 1.42
VPS16-201ENST00000380443 SSTR1P30872 391 aa23.93■■□□□ 1.42
VPS16-201ENST00000380443 CD52P31358 61 aa23.93■■□□□ 1.42
VPS16-201ENST00000380443 GBP2P32456 591 aaPredicted RBP23.93■■□□□ 1.42
VPS16-201ENST00000380443 ATXN1P54253 815 aaKnown RBP23.93■■□□□ 1.42
VPS16-201ENST00000380443 CDK16Q00536 496 aa23.93■■□□□ 1.42
VPS16-201ENST00000380443 GAD2Q05329 585 aa23.93■■□□□ 1.42
VPS16-201ENST00000380443 DEUP1Q05D60 604 aa23.93■■□□□ 1.42
VPS16-201ENST00000380443 NCBP2-AS2Q69YL0 99 aa23.93■■□□□ 1.42
VPS16-201ENST00000380443 CNPY4Q8N129 248 aa23.93■■□□□ 1.42
VPS16-201ENST00000380443 ANKRD42Q8N9B4 389 aa23.93■■□□□ 1.42
VPS16-201ENST00000380443 FBF1Q8TES7 1133 aa23.93■■□□□ 1.42
VPS16-201ENST00000380443 TFB1MQ8WVM0 346 aaKnown RBP23.93■■□□□ 1.42
VPS16-201ENST00000380443 TRIM62Q9BVG3 475 aa23.93■■□□□ 1.42
VPS16-201ENST00000380443 CSNK1G1Q9HCP0 422 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms