RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 SDCBP2Q9H190 292 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 ACSS3Q9H6R3 686 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 MINDY3Q9H8M7 445 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 C17orf75Q9HAS0 396 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 PCDH18Q9HCL0 1135 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 PDLIM7Q9NR12 457 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 HEMK1Q9Y5R4 338 aaPredicted RBP12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 VILLO15195 856 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 DKC1O60832 514 aaKnown RBP eCLIP12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 SORBS2O94875 1100 aaKnown RBP12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 ZWINTO95229 277 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 LDHAP00338 332 aaKnown RBP12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 SAT1P21673 171 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 KCNA4P22459 653 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 PGGT1BP53609 377 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 SESN2P58004 480 aaPredicted RBP12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 LAMTOR4Q0VGL1 99 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 BST1Q10588 318 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 SFT2D3Q587I9 215 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 PAOXQ6QHF9 649 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 MPP5Q8N3R9 675 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 RXFP2Q8WXD0 754 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 TEPSINQ96N21 525 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 PANX3Q96QZ0 392 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 EBF4Q9BQW3 602 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 SNCAIPQ9Y6H5 919 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 ADCY3O60266 1144 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 ONECUT3O60422 494 aaPredicted RBP12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 ZBED1O96006 694 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 ITGAVP06756 1048 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 ABHD2P08910 425 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 ATP6V1B1P15313 513 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 PCSK6P29122 969 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 MLH1P40692 756 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 CA9Q16790 459 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 FAM83AQ86UY5 434 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 TREML1Q86YW5 311 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 NUDCD3Q8IVD9 361 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 NAT8LQ8N9F0 302 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 BANPQ8N9N5 519 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 PYDC1Q8WXC3 89 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 OXCT2Q9BYC2 517 aaPredicted RBP12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 BTBD7Q9P203 1132 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 ACTL7BQ9Y614 415 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 I3L4J1 428 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 PRPSAP2O60256 369 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 ZBTB7AO95365 584 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 TFE3P19532 575 aaPredicted RBP12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 POLR2BP30876 1174 aaKnown RBP12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 GMPSP49915 693 aaPredicted RBP12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 CCR3P51677 355 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 MAP3K10Q02779 954 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 OLIG2Q13516 323 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 KLHL38Q2WGJ6 581 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 GLRA4Q5JXX5 417 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 KLHDC10Q6PID8 442 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 OR6Y1Q8NGX8 325 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 VCPIP1Q96JH7 1222 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 TUT1Q9H6E5 874 aaKnown RBP12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 USP29Q9HBJ7 922 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 NRBP2Q9NSY0 501 aa12.89□□□□□ -0.35
PRPF40B-202ENST00000380281 IQANK1A0A1B0GTG1 560 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 MYOCOSA0A1B0GUC4 107 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 PLA2G6O60733 806 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 CRABP2P29373 138 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 AQP4P55087 323 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 BCAR1P56945 870 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 RPL10AP62906 217 aaKnown RBP12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 SLC25A11Q02978 314 aaKnown RBP12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 ACAP1Q15027 740 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 Q3C1V9 767 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 C1orf146Q5VVC0 180 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 BRSK2Q8IWQ3 736 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 LZICQ8WZA0 190 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 NDRG1Q92597 394 aaKnown RBP12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 NKD2Q969F2 451 aaPredicted RBP12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 ANKRD36BP1Q96IX9 119 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 PCYT2Q99447 389 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 MRPL4Q9BYD3 311 aaKnown RBP12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 DHX33Q9H6R0 707 aaKnown RBP12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 CYLDQ9NQC7 956 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 SPATA7Q9P0W8 599 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 SLC24A2Q9UI40 661 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 MFHAS1Q9Y4C4 1052 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 C10orf71Q711Q0 1435 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 PDE5AO76074 875 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 KRT7P08729 469 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 PAX3P23760 479 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 RGS2P41220 211 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 CYLC2Q14093 348 aaPredicted RBP12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 TMEM259Q4ZIN3 620 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 ADGRD1Q6QNK2 874 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 B3GNT6Q6ZMB0 384 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 ACAD11Q709F0 780 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 SPNS2Q8IVW8 549 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 SMYD1Q8NB12 490 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 GAB3Q8WWW8 586 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 DGCR14Q96DF8 476 aaKnown RBP12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 OXNAD1Q96HP4 312 aaPredicted RBP12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 SENP1Q9P0U3 644 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms