RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SLC10A2Q12908 348 aaPredicted RBP20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 EMC10Q5UCC4 262 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 CEP128Q6ZU80 1094 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 SPATA2LQ8IUW3 424 aaPredicted RBP20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 PPIL6Q8IXY8 311 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 EDEM1Q92611 657 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 C9orf72Q96LT7 481 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 USP3Q9Y6I4 520 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 MYO16Q9Y6X6 1858 aa20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 MYO18AQ92614 2054 aaKnown RBP20.61■□□□□ 0.89
PDLIM5-205ENST00000380180 SMIM23A6NLE4 172 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 TRAPPC3O43617 180 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 ZFXP17010 805 aaPredicted RBP20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 HPDP32754 393 aaPredicted RBP20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 ARL4AP40617 200 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 MAGEA4P43358 317 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 GATMP50440 423 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 ATN1P54259 1190 aaPredicted RBP20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 GBE1Q04446 702 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 DMTNQ08495 405 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 C4orf50Q6ZRC1 276 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 EPS8L3Q8TE67 593 aaKnown RBP20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 IRGQQ8WZA9 623 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 SCLYQ96I15 445 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 CASD1Q96PB1 797 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 PNPLA8Q9NP80 782 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 SAYSD1Q9NPB0 183 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 BCLAF3A2AJT9 711 aaKnown RBP20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 DCDC2CA8MYV0 355 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 RBL1P28749 1068 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 SLC39A12Q504Y0 691 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 C6orf118Q5T5N4 469 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 ANKRD22Q5VYY1 191 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 NAT8LQ8N9F0 302 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 SCAMP5Q8TAC9 235 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 LRRN4Q8WUT4 740 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 SLC9A7Q96T83 725 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 CAPS2Q9BXY5 557 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 WDR6Q9NNW5 1121 aaKnown RBP20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 ETNK2Q9NVF9 386 aa20.6■□□□□ 0.89
PDLIM5-205ENST00000380180 GOLGA8MH3BSY2 632 aa20.59■□□□□ 0.89
PDLIM5-205ENST00000380180 RASGRF2O14827 1237 aa20.59■□□□□ 0.89
PDLIM5-205ENST00000380180 KCNN4O15554 427 aa20.59■□□□□ 0.89
PDLIM5-205ENST00000380180 SLCO1A2P46721 670 aa20.59■□□□□ 0.89
PDLIM5-205ENST00000380180 NR2C2P49116 596 aa20.59■□□□□ 0.89
PDLIM5-205ENST00000380180 MAGOHP61326 146 aaKnown RBP20.59■□□□□ 0.89
PDLIM5-205ENST00000380180 FAM182AQ5T1J6 154 aa20.59■□□□□ 0.89
PDLIM5-205ENST00000380180 BSPRYQ5W0U4 402 aa20.59■□□□□ 0.89
PDLIM5-205ENST00000380180 CROCCP2Q86T23 111 aa20.59■□□□□ 0.89
PDLIM5-205ENST00000380180 SCML4Q8N228 414 aa20.59■□□□□ 0.89
PDLIM5-205ENST00000380180 APBB2Q92870 758 aa20.59■□□□□ 0.89
PDLIM5-205ENST00000380180 TLCD1Q96CP7 247 aa20.59■□□□□ 0.89
PDLIM5-205ENST00000380180 PGM2Q96G03 612 aa20.59■□□□□ 0.89
PDLIM5-205ENST00000380180 BEGAINQ9BUH8 593 aa20.59■□□□□ 0.89
PDLIM5-205ENST00000380180 RCOR3Q9P2K3 495 aaPredicted RBP20.59■□□□□ 0.89
PDLIM5-205ENST00000380180 LRFN2Q9ULH4 789 aa20.59■□□□□ 0.89
PDLIM5-205ENST00000380180 NUP205Q92621 2012 aa20.59■□□□□ 0.89
PDLIM5-205ENST00000380180 MICAL3Q7RTP6 2002 aa20.58■□□□□ 0.89
PDLIM5-205ENST00000380180 ADRA1BP35368 520 aa20.58■□□□□ 0.89
PDLIM5-205ENST00000380180 GRIK1P39086 918 aa20.58■□□□□ 0.89
PDLIM5-205ENST00000380180 GAD2Q05329 585 aa20.58■□□□□ 0.89
PDLIM5-205ENST00000380180 NCBP2-AS2Q69YL0 99 aa20.58■□□□□ 0.89
PDLIM5-205ENST00000380180 RNF139Q8WU17 664 aa20.58■□□□□ 0.89
PDLIM5-205ENST00000380180 PGAP3Q96FM1 320 aaPredicted RBP20.58■□□□□ 0.89
PDLIM5-205ENST00000380180 ROPN1BQ9BZX4 212 aaPredicted RBP20.58■□□□□ 0.89
PDLIM5-205ENST00000380180 ZCWPW1Q9H0M4 648 aa20.58■□□□□ 0.89
PDLIM5-205ENST00000380180 ROPN1Q9HAT0 212 aaPredicted RBP20.58■□□□□ 0.89
PDLIM5-205ENST00000380180 DDIT4Q9NX09 232 aa20.58■□□□□ 0.89
PDLIM5-205ENST00000380180 RRN3Q9NYV6 651 aa20.58■□□□□ 0.89
PDLIM5-205ENST00000380180 MFHAS1Q9Y4C4 1052 aa20.58■□□□□ 0.89
PDLIM5-205ENST00000380180 COL4A4P53420 1690 aaPredicted RBP20.58■□□□□ 0.89
PDLIM5-205ENST00000380180 TCRBV7S3A2A0A539 114 aa20.58■□□□□ 0.88
PDLIM5-205ENST00000380180 SHOX2O60902 331 aaPredicted RBP20.58■□□□□ 0.88
PDLIM5-205ENST00000380180 CCL23P55773 120 aa20.58■□□□□ 0.88
PDLIM5-205ENST00000380180 BASP1P80723 227 aaKnown RBP20.58■□□□□ 0.88
PDLIM5-205ENST00000380180 LONRF1Q17RB8 773 aa20.58■□□□□ 0.88
PDLIM5-205ENST00000380180 EFHC2Q5JST6 749 aa20.58■□□□□ 0.88
PDLIM5-205ENST00000380180 HP1BP3Q5SSJ5 553 aaPredicted RBP20.58■□□□□ 0.88
PDLIM5-205ENST00000380180 TTC19Q6DKK2 380 aaPredicted RBP20.58■□□□□ 0.88
PDLIM5-205ENST00000380180 RTP4Q96DX8 246 aa20.58■□□□□ 0.88
PDLIM5-205ENST00000380180 ANLNQ9NQW6 1124 aa20.58■□□□□ 0.88
PDLIM5-205ENST00000380180 ARHGEF4Q9NR80 690 aa20.58■□□□□ 0.88
PDLIM5-205ENST00000380180 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.58■□□□□ 0.88
PDLIM5-205ENST00000380180 FBXW11Q9UKB1 542 aa20.58■□□□□ 0.88
PDLIM5-205ENST00000380180 ADAM28Q9UKQ2 775 aa20.58■□□□□ 0.88
PDLIM5-205ENST00000380180 CFAP69A5D8W1 941 aa20.57■□□□□ 0.88
PDLIM5-205ENST00000380180 RGS16O15492 202 aaPredicted RBP20.57■□□□□ 0.88
PDLIM5-205ENST00000380180 CREB3O43889 395 aa20.57■□□□□ 0.88
PDLIM5-205ENST00000380180 ACTN2P35609 894 aa20.57■□□□□ 0.88
PDLIM5-205ENST00000380180 XRCC4Q13426 336 aa20.57■□□□□ 0.88
PDLIM5-205ENST00000380180 FASTKD3Q14CZ7 662 aaKnown RBP20.57■□□□□ 0.88
PDLIM5-205ENST00000380180 VARS2Q5ST30 1063 aaKnown RBP20.57■□□□□ 0.88
PDLIM5-205ENST00000380180 CENPUQ71F23 418 aa20.57■□□□□ 0.88
PDLIM5-205ENST00000380180 CRIPAKQ8N1N5 446 aa20.57■□□□□ 0.88
PDLIM5-205ENST00000380180 CCDC33Q8N5R6 958 aa20.57■□□□□ 0.88
PDLIM5-205ENST00000380180 NTAN1Q96AB6 310 aa20.57■□□□□ 0.88
PDLIM5-205ENST00000380180 HIPK3Q9H422 1215 aa20.57■□□□□ 0.88
PDLIM5-205ENST00000380180 DTLQ9NZJ0 730 aa20.57■□□□□ 0.88
PDLIM5-205ENST00000380180 HCSTQ9UBK5 93 aa20.57■□□□□ 0.88
PDLIM5-205ENST00000380180 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms