RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 CCDC6Q16204 474 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 VARS2Q5ST30 1063 aaKnown RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 GPAT2Q6NUI2 795 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 NLRP14Q86W24 1093 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 ZNF473Q8WTR7 871 aaKnown RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 KLK6Q92876 244 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 MTMR8Q96EF0 704 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 VMP1Q96GC9 406 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 ZBTB45Q96K62 511 aaPredicted RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 ERGIC2Q96RQ1 377 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 UBXN6Q9BZV1 441 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 TM6SF2Q9BZW4 377 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 AMFRQ9UKV5 643 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 CYP8B1Q9UNU6 501 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 PLAGL2Q9UPG8 496 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 PVALEFA0A1B0GWK0 134 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 TARSL2A2RTX5 802 aaKnown RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 B4GALT5O43286 388 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 DYRK3O43781 588 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 DIAPH2O60879 1101 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 TNNI3P19429 210 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 KELP23276 732 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 DGKGP49619 791 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 RARRES1P49788 294 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 ERFP50548 548 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 NOVA1P51513 510 aaKnown RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 MAPK10P53779 464 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 ZKSCAN8Q15776 578 aaPredicted RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 GKAP1Q5VSY0 366 aaPredicted RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 JADE1Q6IE81 842 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 VITQ6UXI7 678 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 TMEM86AQ8N2M4 240 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 RBBP8NLQ8NC74 664 aaPredicted RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 VPS39Q96JC1 886 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 AGAP3Q96P47 875 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 DDX47Q9H0S4 455 aaKnown RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 LMAN2LQ9H0V9 348 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 VPS37BQ9H9H4 285 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 ARHGEF3Q9NR81 526 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 KCND2Q9NZV8 630 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 CNOT8Q9UFF9 292 aaKnown RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 SUN2Q9UH99 717 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 ZNF112Q9UJU3 913 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 NOVA2Q9UNW9 492 aaKnown RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 PKP3Q9Y446 797 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 SPEF2Q9C093 1822 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 H0Y3Z8 333 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 STX7O15400 261 aaKnown RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 LUC7L3O95232 432 aaKnown RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 HIST1H2AGP0C0S8 130 aaPredicted RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 ARF4P18085 180 aaPredicted RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 HIST1H2ADP20671 130 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 LSP1P33241 339 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 TDGQ13569 410 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 SLC2A14Q8TDB8 520 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 E2F7Q96AV8 911 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 ULK4Q96C45 1275 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 IQCDQ96DY2 449 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 HIST1H2AHQ96KK5 128 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 CDCA3Q99618 268 aaPredicted RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 HIST1H2AJQ99878 128 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 H2AFJQ9BTM1 129 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 PBX4Q9BYU1 374 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 ASB7Q9H672 318 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 KCNK9Q9NPC2 374 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 SIRPGQ9P1W8 387 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 CPQQ9Y646 472 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 USH1CQ9Y6N9 552 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 ARHGAP42A6NI28 874 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 PSMD12O00232 456 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-202ENST00000379446 EEF2KO00418 725 aaKnown RBP6.76□□□□□ -1.33
NEDD9-202ENST00000379446 MGEA5O60502 916 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 KRT3P12035 628 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 RARGP13631 454 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 HNF1BP35680 557 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 CCNHP51946 323 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-202ENST00000379446 CDH6P55285 790 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 YWHAGP61981 247 aaKnown RBP eCLIP6.76□□□□□ -1.33
NEDD9-202ENST00000379446 FOXD4Q12950 439 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-202ENST00000379446 PCBP1Q15365 356 aaKnown RBP eCLIP6.76□□□□□ -1.33
NEDD9-202ENST00000379446 SLC35G1Q2M3R5 365 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 MIIPQ5JXC2 388 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 ESRP1Q6NXG1 681 aaKnown RBP6.76□□□□□ -1.33
NEDD9-202ENST00000379446 ALKBH5Q6P6C2 394 aaKnown RBP6.76□□□□□ -1.33
NEDD9-202ENST00000379446 ANGPTL8Q6UXH0 198 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 FAM47EQ6ZV65 393 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.76□□□□□ -1.33
NEDD9-202ENST00000379446 HID1Q8IV36 788 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 COLGALT1Q8NBJ5 622 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 LEMD2Q8NC56 503 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 ASAP3Q8TDY4 903 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 LRRC15Q8TF66 581 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 FEM1CQ96JP0 617 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 RMDN2Q96LZ7 410 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 TSSK1BQ9BXA7 367 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 BLOC1S4Q9NUP1 217 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 CEP72Q9P209 647 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 SCINQ9Y6U3 715 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 NWD2Q9ULI1 1742 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 COL1A1P02452 1464 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms