RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 BCO2Q9BYV7 579 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 UNKQ9C0B0 810 aaKnown RBP13.38□□□□□ -0.27
USP11-204ENST00000377107 NXF3Q9H4D5 531 aaKnown RBP13.38□□□□□ -0.27
USP11-204ENST00000377107 SMYD2Q9NRG4 433 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 MCF2P10911 925 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 SLC6A3Q01959 620 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 ENPEPQ07075 957 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 CTU1Q7Z7A3 348 aaKnown RBP13.38□□□□□ -0.27
USP11-204ENST00000377107 PQLC3Q8N755 202 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 LENG1Q96BZ8 264 aaPredicted RBP13.38□□□□□ -0.27
USP11-204ENST00000377107 MIEF2Q96C03 454 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 MIPEPQ99797 713 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 NRDE2Q9H7Z3 1164 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 TEX264Q9Y6I9 313 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 LOXHD1Q8IVV2 1947 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 PEX11AO75192 247 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 MGAT1P26572 445 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 SULT1E1P49888 294 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 STX3Q13277 289 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 UBAP2LQ14157 1087 aaKnown RBP13.38□□□□□ -0.27
USP11-204ENST00000377107 ERO1BQ86YB8 467 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 FNIP1Q8TF40 1166 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 EBF2Q9HAK2 575 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 USP29Q9HBJ7 922 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 ENO4A6NNW6 628 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 SOCS7O14512 581 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 SLC25A27O95847 323 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 APOEP02649 317 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 RARBP10826 455 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 EDNRBP24530 442 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 ADORA2AP29274 412 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 GNL1P36915 607 aaPredicted RBP13.37□□□□□ -0.27
USP11-204ENST00000377107 CDK16Q00536 496 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 MAGEC3Q8TD91 643 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 RNF34Q969K3 372 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 CDCA5Q96FF9 252 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 ZMAT2Q96NC0 199 aaKnown RBP13.37□□□□□ -0.27
USP11-204ENST00000377107 CDHR5Q9HBB8 845 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 PACSIN3Q9UKS6 424 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 ERVK-10P10266 1014 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 HDAC4P56524 1084 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 PITX1P78337 314 aaPredicted RBP13.37□□□□□ -0.27
USP11-204ENST00000377107 SLC10A2Q12908 348 aaPredicted RBP13.37□□□□□ -0.27
USP11-204ENST00000377107 GRM1Q13255 1194 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 PPM1JQ5JR12 505 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 LMNTD2Q8IXW0 634 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 BTBD10Q9BSF8 475 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 ASB7Q9H672 318 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 CYP3A43Q9HB55 503 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 KLHL8Q9P2G9 620 aaPredicted RBP13.37□□□□□ -0.27
USP11-204ENST00000377107 KANSL3Q9P2N6 904 aa13.37□□□□□ -0.27
USP11-204ENST00000377107 MTO1Q9Y2Z2 717 aaKnown RBP13.37□□□□□ -0.27
USP11-204ENST00000377107 MAGEB2O15479 319 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 TYK2P29597 1187 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 PGGT1BP53609 377 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 KCNJ11Q14654 390 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 GRIK4Q16099 956 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 SOWAHAQ2M3V2 549 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 CFAP157Q5JU67 520 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 ATG16L1Q676U5 607 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 LCLAT1Q6UWP7 414 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 RPAINQ86UA6 219 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 CAND1Q86VP6 1230 aaKnown RBP13.36□□□□□ -0.27
USP11-204ENST00000377107 CDKL3Q8IVW4 592 aaPredicted RBP13.36□□□□□ -0.27
USP11-204ENST00000377107 TP53INP2Q8IXH6 220 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 ANKRD13AQ8IZ07 590 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 FBXO27Q8NI29 283 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 TBCBQ99426 244 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 EBF4Q9BQW3 602 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 LRRC4Q9HBW1 653 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 TSPAN1O60635 241 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 ALADP13716 330 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 ADIGQ0VDE8 80 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 PEX6Q13608 980 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 C6orf163Q5TEZ5 329 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 CAPRIN2Q6IMN6 1127 aaKnown RBP13.36□□□□□ -0.27
USP11-204ENST00000377107 TEX9Q8N6V9 391 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 COLGALT1Q8NBJ5 622 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 PPFIBP2Q8ND30 876 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 USP33Q8TEY7 942 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 WDR60Q8WVS4 1066 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 DNAJC9Q8WXX5 260 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 SLC10A4Q96EP9 437 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 ZNF358Q9NW07 568 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 TAS2R1Q9NYW7 299 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 COL11A1P12107 1806 aaPredicted RBP13.36□□□□□ -0.27
USP11-204ENST00000377107 SLC15A5A6NIM6 579 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 CIB2O75838 187 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 ZMPSTE24O75844 475 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 RECQL4O94761 1208 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 TPBGLP0DKB5 382 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 TPH1P17752 444 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 PROZP22891 400 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 ATXN3P54252 364 aaPredicted RBP13.36□□□□□ -0.27
USP11-204ENST00000377107 SARNPP82979 210 aaKnown RBP13.36□□□□□ -0.27
USP11-204ENST00000377107 C1orf146Q5VVC0 180 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 DEFB106AQ8N104 65 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 BEST2Q8NFU1 509 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 OR6J1Q8NGC5 347 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 MOCOSQ96EN8 888 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms