RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SMIM10L2AP0DMW4 78 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 SMIM10L2BP0DMW5 78 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 IMPDH2P12268 514 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 SCNN1GP51170 649 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 NME5P56597 212 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 POU6F1Q14863 301 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 POTEAQ6S8J7 498 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 ZPBP2Q6X784 338 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 MOB2Q70IA6 237 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 NOA1Q8NC60 698 aaKnown RBP14.02□□□□□ -0.17
GPC6-201ENST00000377047 CCDC126Q96EE4 140 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 VANGL2Q9ULK5 521 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 B2RBV5 119 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 EML1O00423 815 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 NCAM2O15394 837 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 HOXA10P31260 410 aaPredicted RBP14.01□□□□□ -0.17
GPC6-201ENST00000377047 SLC16A1P53985 500 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 YWHAZP63104 245 aaKnown RBP14.01□□□□□ -0.17
GPC6-201ENST00000377047 CHADLQ6NUI6 762 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 CCT8L2Q96SF2 557 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 RRN3Q9NYV6 651 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 GNG14A0A1W2PPG7 69 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 PDZK1P1A8MUH7 402 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 RBAK-RBAKDNI3L0D1 243 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 MAPK1P28482 360 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 ANXA11P50995 505 aaKnown RBP14.01□□□□□ -0.17
GPC6-201ENST00000377047 TPGS1Q6ZTW0 290 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 GPR142Q7Z601 462 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 BBS7Q8IWZ6 715 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 KIAA0895Q8NCT3 520 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 ZNF606Q8WXB4 792 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 SERPINB12Q96P63 405 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 TSC22D3Q99576 134 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 GPAMQ9HCL2 828 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 HPSEQ9Y251 543 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 NRCAMQ92823 1304 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 ARHGAP23Q9P227 1491 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 C1QBPQ07021 282 aaKnown RBP14.01□□□□□ -0.17
GPC6-201ENST00000377047 GJC2Q5T442 439 aaPredicted RBP14.01□□□□□ -0.17
GPC6-201ENST00000377047 SETD3Q86TU7 594 aaPredicted RBP14.01□□□□□ -0.17
GPC6-201ENST00000377047 DIS3LQ8TF46 1054 aaKnown RBP14.01□□□□□ -0.17
GPC6-201ENST00000377047 SERAC1Q96JX3 654 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 SYTL2Q9HCH5 934 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 TDRKHQ9Y2W6 561 aaKnown RBP14.01□□□□□ -0.17
GPC6-201ENST00000377047 CYTH3O43739 400 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 CSHL1Q14406 222 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 EARS2Q5JPH6 523 aaKnown RBP14.01□□□□□ -0.17
GPC6-201ENST00000377047 AP1ARQ63HQ0 302 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 NT5DC4Q86YG4 428 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 ZDHHC17Q8IUH5 632 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 ARID3BQ8IVW6 561 aaPredicted RBP14.01□□□□□ -0.17
GPC6-201ENST00000377047 BRSK2Q8IWQ3 736 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 MIER2Q8N344 545 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 VPS50Q96JG6 964 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 ZNF558Q96NG5 402 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 NDEL1Q9GZM8 345 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 IGSF6O95976 241 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 CTNNB1P35222 781 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 HSD17B3P37058 310 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 MTA1Q13330 715 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 DOK6Q6PKX4 331 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 TRPM4Q8TD43 1214 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 PCDHAC2Q9Y5I4 1007 aa14.01□□□□□ -0.17
GPC6-201ENST00000377047 FRMPD4Q14CM0 1322 aa14□□□□□ -0.17
GPC6-201ENST00000377047 MGAT4DA6NG13 374 aa14□□□□□ -0.17
GPC6-201ENST00000377047 SLC15A5A6NIM6 579 aa14□□□□□ -0.17
GPC6-201ENST00000377047 HPGDP15428 266 aa14□□□□□ -0.17
GPC6-201ENST00000377047 CPA2P48052 419 aa14□□□□□ -0.17
GPC6-201ENST00000377047 MRPS6P82932 125 aaKnown RBP14□□□□□ -0.17
GPC6-201ENST00000377047 MCL1Q07820 350 aa14□□□□□ -0.17
GPC6-201ENST00000377047 LLGL2Q6P1M3 1020 aa14□□□□□ -0.17
GPC6-201ENST00000377047 MCOLN2Q8IZK6 566 aa14□□□□□ -0.17
GPC6-201ENST00000377047 GALNT4Q8N4A0 578 aa14□□□□□ -0.17
GPC6-201ENST00000377047 VMP1Q96GC9 406 aa14□□□□□ -0.17
GPC6-201ENST00000377047 PNMA5Q96PV4 448 aa14□□□□□ -0.17
GPC6-201ENST00000377047 RMND5AQ9H871 391 aa14□□□□□ -0.17
GPC6-201ENST00000377047 CPSF4O95639 269 aaKnown RBP14□□□□□ -0.17
GPC6-201ENST00000377047 PWP1Q13610 501 aa14□□□□□ -0.17
GPC6-201ENST00000377047 TMEM119Q4V9L6 283 aa14□□□□□ -0.17
GPC6-201ENST00000377047 CES5AQ6NT32 575 aa14□□□□□ -0.17
GPC6-201ENST00000377047 DEFB106AQ8N104 65 aa14□□□□□ -0.17
GPC6-201ENST00000377047 EPS8L3Q8TE67 593 aaKnown RBP14□□□□□ -0.17
GPC6-201ENST00000377047 FAM163AQ96GL9 167 aaPredicted RBP14□□□□□ -0.17
GPC6-201ENST00000377047 CYP39A1Q9NYL5 469 aa14□□□□□ -0.17
GPC6-201ENST00000377047 DEPDC5O75140 1603 aa14□□□□□ -0.17
GPC6-201ENST00000377047 O00370 1275 aa14□□□□□ -0.17
GPC6-201ENST00000377047 TPH1P17752 444 aa14□□□□□ -0.17
GPC6-201ENST00000377047 POLR2EP19388 210 aaKnown RBP14□□□□□ -0.17
GPC6-201ENST00000377047 OVGP1Q12889 678 aa14□□□□□ -0.17
GPC6-201ENST00000377047 MTSS1LQ765P7 747 aa14□□□□□ -0.17
GPC6-201ENST00000377047 CCDC60Q8IWA6 550 aaPredicted RBP14□□□□□ -0.17
GPC6-201ENST00000377047 INPP5DQ92835 1189 aa14□□□□□ -0.17
GPC6-201ENST00000377047 SENP8Q96LD8 212 aa14□□□□□ -0.17
GPC6-201ENST00000377047 WHRNQ9P202 907 aa14□□□□□ -0.17
GPC6-201ENST00000377047 NUDT5Q9UKK9 219 aa14□□□□□ -0.17
GPC6-201ENST00000377047 KDM4FA0A1W2PPD8 638 aa14□□□□□ -0.17
GPC6-201ENST00000377047 DNAJC3Q13217 504 aa14□□□□□ -0.17
GPC6-201ENST00000377047 DSG4Q86SJ6 1040 aa14□□□□□ -0.17
GPC6-201ENST00000377047 IL17RAQ96F46 866 aa14□□□□□ -0.17
GPC6-201ENST00000377047 SEC16BQ96JE7 1060 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms