RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ANKRD12Q6UB98 2062 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 KLRG2A4D1S0 409 aaPredicted RBP14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 GPR25O00155 361 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 NELFEP18615 380 aaKnown RBP14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 NEK3P51956 506 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 COPAP53621 1224 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 NME5P56597 212 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 OASLQ15646 514 aaKnown RBP14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SYT15Q9BQS2 421 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 MINDY3Q9H8M7 445 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 APPL1Q9UKG1 709 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SNCAIPQ9Y6H5 919 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CNTNAP1P78357 1384 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 TPP1O14773 563 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PRPF4O43172 522 aaKnown RBP eCLIP14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 APOEP02649 317 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CSH1P0DML2 217 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CSH2P0DML3 217 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ATP6V1C1P21283 382 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 RANBP1P43487 201 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SLC12A1Q13621 1099 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 LRRC43Q8N309 656 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 C1orf127Q8N9H9 656 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CNBD2Q96M20 576 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 RNF157Q96PX1 679 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 TMPRSS4Q9NRS4 437 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 C20orf96Q9NUD7 363 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 BFARQ9NZS9 450 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CYTH4Q9UIA0 394 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 DNAJC6O75061 913 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SEC24DO94855 1032 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PAPOLAP51003 745 aaKnown RBP14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 AP3M2P53677 418 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PRAMEP78395 509 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 BOLA3Q53S33 107 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 B3GNT9Q6UX72 402 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 WDTC1Q8N5D0 677 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SLC7A14Q8TBB6 771 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 NKD2Q969F2 451 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 DCPSQ96C86 337 aaKnown RBP14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ZNF214Q9UL59 606 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PIN4Q9Y237 131 aaKnown RBP14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SPDYE16A6NNV3 312 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SPATA31C2B4DYI2 1134 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 M0QYT0 321 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 TP73O15350 636 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PHGDHO43175 533 aaKnown RBP14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 GOT1P17174 413 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ABL2P42684 1182 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SNX16P57768 344 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PCSK7Q16549 785 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PPP1R26Q5T8A7 1209 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 UNC5AQ6ZN44 842 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 XYLT1Q86Y38 959 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 BANPQ8N9N5 519 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ICA1LQ8NDH6 482 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SLC35B2Q8TB61 432 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ZSCAN18Q8TBC5 510 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 MAGEC3Q8TD91 643 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 TAGLN3Q9UI15 199 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 LRCH1Q9Y2L9 728 aa14.85□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SPATA31A6Q5VVP1 1343 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 DFFAO00273 331 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 T-ENOLP0DO92 83 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 MX2P20592 715 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 GNL1P36915 607 aaPredicted RBP14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SLC1A6P48664 564 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 TUBP50607 506 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 DSG1Q02413 1049 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 BLMHQ13867 455 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ADGRD1Q6QNK2 874 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 TMPRSS6Q8IU80 811 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 AFG1LQ8WV93 481 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ZNF518BQ9C0D4 1074 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 DHX33Q9H6R0 707 aaKnown RBP14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CITO14578 2027 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 KIAA1551Q9HCM1 1747 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 RALBP11234 206 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ABCD1P33897 745 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PLK1P53350 603 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 YWHAZP63104 245 aaKnown RBP14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 TWF2Q6IBS0 349 aaKnown RBP14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SNX31Q8N9S9 440 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 EDEM1Q92611 657 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SLCO2A1Q92959 643 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ZNF184Q99676 751 aaPredicted RBP14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 GOLGA2P5Q9HBQ8 144 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PTPRHQ9HD43 1115 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PRKAG3Q9UGI9 489 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 MFHAS1Q9Y4C4 1052 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PAPPAQ13219 1627 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CNTNAP2Q9UHC6 1331 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 NPM3O75607 178 aaKnown RBP14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 METTL18O95568 372 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 IRX1P78414 480 aaPredicted RBP14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 USP10Q14694 798 aaKnown RBP14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CNGA3Q16281 694 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PMF1Q6P1K2 205 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 STRA8Q7Z7C7 330 aa14.84□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ULK2Q8IYT8 1036 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms