RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 ANKRD20A4Q4UJ75 823 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 ARPINQ7Z6K5 226 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 PASD1Q8IV76 773 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 TMEM192Q8IY95 271 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 TMC2Q8TDI7 906 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 SLC26A7Q8TE54 656 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 AFG1LQ8WV93 481 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 CPT1BQ92523 772 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 TRIM11Q96F44 468 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 ACAP3Q96P50 834 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 APOBEC3GQ9HC16 384 aaKnown RBP13.38□□□□□ -0.27
MSH5-204ENST00000375755 A0A0B4J269 797 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 TCRBV7S3A2A0A539 114 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 KLF11O14901 512 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 C4BPAP04003 597 aaKnown RBP13.38□□□□□ -0.27
MSH5-204ENST00000375755 C6orf222P0C671 652 aaPredicted RBP13.38□□□□□ -0.27
MSH5-204ENST00000375755 AQP5P55064 265 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 TTLL4Q14679 1199 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 EFCAB12Q6NXP0 572 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 DUS1LQ6P1R4 473 aaKnown RBP13.38□□□□□ -0.27
MSH5-204ENST00000375755 KLHDC10Q6PID8 442 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 C15orf39Q6ZRI6 1047 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 PALM2Q8IXS6 379 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 LZICQ8WZA0 190 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 USP6NLQ92738 828 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 TCHPQ9BT92 498 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 STYXL1Q9Y6J8 313 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.38□□□□□ -0.27
MSH5-204ENST00000375755 CCDC195A0A1B0GUA6 201 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 HLA-DRAP01903 254 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 CDK4P11802 303 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 GTF2H1P32780 548 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 HIC1Q14526 733 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 RCOR2Q8IZ40 523 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 METTL25Q8N6Q8 603 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 ABTB1Q969K4 478 aaPredicted RBP13.38□□□□□ -0.27
MSH5-204ENST00000375755 WWP1Q9H0M0 922 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 CPA4Q9UI42 421 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 CNTNAP2Q9UHC6 1331 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 TLR3O15455 904 aaKnown RBP13.37□□□□□ -0.27
MSH5-204ENST00000375755 AP1G1O43747 822 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 CST3P01034 146 aaPredicted RBP13.37□□□□□ -0.27
MSH5-204ENST00000375755 MCCD1P59942 119 aaPredicted RBP13.37□□□□□ -0.27
MSH5-204ENST00000375755 TRIP10Q15642 601 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 RALGPS1Q5JS13 557 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 KLC3Q6P597 504 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 GPR142Q7Z601 462 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 IGDCC3Q8IVU1 814 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 CATSPER2Q96P56 530 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 KATNBL1Q9H079 304 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 C1orf21Q9H246 121 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 NMRK2Q9NPI5 230 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 SOX13Q9UN79 622 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 IQANK1A0A1B0GTG1 560 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 I3L4J1 428 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 FAM189A1O60320 539 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 INSRRP14616 1297 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 GALK1P51570 392 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 GTF2A2P52657 109 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 GDF10P55107 478 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 TMPRSS15P98073 1019 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 FOLH1Q04609 750 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 PSMD6Q15008 389 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 SPRYD7Q5W111 196 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 EEF1DP3Q658K8 133 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 TXNRD3NBQ6F5E7 133 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 SPOCD1Q6ZMY3 1216 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 PPIL6Q8IXY8 311 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 NAT8LQ8N9F0 302 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 NPLOC4Q8TAT6 608 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 NKD2Q969F2 451 aaPredicted RBP13.37□□□□□ -0.27
MSH5-204ENST00000375755 C7orf26Q96N11 449 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 SRPK1Q96SB4 655 aaKnown RBP13.37□□□□□ -0.27
MSH5-204ENST00000375755 EBF4Q9BQW3 602 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.37□□□□□ -0.27
MSH5-204ENST00000375755 SAE1Q9UBE0 346 aaPredicted RBP13.37□□□□□ -0.27
MSH5-204ENST00000375755 PPME1Q9Y570 386 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 IVNS1ABPQ9Y6Y0 642 aa13.37□□□□□ -0.27
MSH5-204ENST00000375755 IGKV6-21A0A0C4DH24 114 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 CCDC160A6NGH7 325 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 PDE5AO76074 875 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 TMEM63AO94886 807 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 VTNP04004 478 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 LGALS2P05162 132 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 ITGAVP06756 1048 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 YY1P25490 414 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 RPL5P46777 297 aaKnown RBP13.36□□□□□ -0.27
MSH5-204ENST00000375755 EPHB1P54762 984 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 ADARP55265 1226 aaKnown RBP13.36□□□□□ -0.27
MSH5-204ENST00000375755 SFSWAPQ12872 951 aaKnown RBP13.36□□□□□ -0.27
MSH5-204ENST00000375755 NADK2Q4G0N4 442 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 LIN9Q5TKA1 542 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 PLPPR4Q7Z2D5 763 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 HIPK4Q8NE63 616 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 PCDHGB4Q9UN71 923 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 PCDHGB5Q9Y5G0 923 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 E7ESA3 106 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 INO80B-WBP1J3KQ70 363 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 PRKCBP05771 671 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 EMP3P54852 163 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms