RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 PCMTD2Q9NV79 361 aa15.07■□□□□ 0
MSH5-201ENST00000375703 C2CD2Q9Y426 696 aa15.07■□□□□ 0
MSH5-201ENST00000375703 FAM159BA6NKW6 160 aa15.06■□□□□ 0
MSH5-201ENST00000375703 CAPN9O14815 690 aa15.06■□□□□ 0
MSH5-201ENST00000375703 GCATO75600 419 aa15.06■□□□□ 0
MSH5-201ENST00000375703 VTNP04004 478 aa15.06■□□□□ 0
MSH5-201ENST00000375703 ENO1P06733 434 aaKnown RBP15.06■□□□□ 0
MSH5-201ENST00000375703 CRHR1P34998 444 aa15.06■□□□□ 0
MSH5-201ENST00000375703 HDAC4P56524 1084 aa15.06■□□□□ 0
MSH5-201ENST00000375703 OCRLQ01968 901 aa15.06■□□□□ 0
MSH5-201ENST00000375703 SLC34A1Q06495 639 aa15.06■□□□□ 0
MSH5-201ENST00000375703 KCTD2Q14681 263 aa15.06■□□□□ 0
MSH5-201ENST00000375703 TTC30AQ86WT1 665 aa15.06■□□□□ 0
MSH5-201ENST00000375703 TMPRSS6Q8IU80 811 aa15.06■□□□□ 0
MSH5-201ENST00000375703 PDCD7Q8N8D1 485 aaKnown RBP15.06■□□□□ 0
MSH5-201ENST00000375703 KIF12Q96FN5 646 aa15.06■□□□□ 0
MSH5-201ENST00000375703 ZNF333Q96JL9 665 aa15.06■□□□□ 0
MSH5-201ENST00000375703 SLC4A5Q9BY07 1137 aa15.06■□□□□ 0
MSH5-201ENST00000375703 WWP1Q9H0M0 922 aa15.06■□□□□ 0
MSH5-201ENST00000375703 FAM124BQ9H5Z6 455 aaPredicted RBP15.06■□□□□ 0
MSH5-201ENST00000375703 NMRK1Q9NWW6 199 aa15.06■□□□□ 0
MSH5-201ENST00000375703 MKS1Q9NXB0 559 aa15.06■□□□□ 0
MSH5-201ENST00000375703 CAPN14A8MX76 684 aa15.06■□□□□ 0
MSH5-201ENST00000375703 IRF6O14896 467 aa15.06■□□□□ 0
MSH5-201ENST00000375703 STAU1O95793 577 aaKnown RBP15.06■□□□□ 0
MSH5-201ENST00000375703 MAGEA3P43357 314 aa15.06■□□□□ 0
MSH5-201ENST00000375703 AQP5P55064 265 aa15.06■□□□□ 0
MSH5-201ENST00000375703 GBE1Q04446 702 aa15.06■□□□□ 0
MSH5-201ENST00000375703 SLC10A2Q12908 348 aaPredicted RBP15.06■□□□□ 0
MSH5-201ENST00000375703 TTLL4Q14679 1199 aa15.06■□□□□ 0
MSH5-201ENST00000375703 TREML1Q86YW5 311 aa15.06■□□□□ 0
MSH5-201ENST00000375703 CCDC33Q8N5R6 958 aa15.06■□□□□ 0
MSH5-201ENST00000375703 DTX3LQ8TDB6 740 aa15.06■□□□□ 0
MSH5-201ENST00000375703 DEPDC1BQ8WUY9 529 aa15.06■□□□□ 0
MSH5-201ENST00000375703 SLC35F5Q8WV83 523 aa15.06■□□□□ 0
MSH5-201ENST00000375703 MMP19Q99542 508 aa15.06■□□□□ 0
MSH5-201ENST00000375703 B3GNT5Q9BYG0 378 aa15.06■□□□□ 0
MSH5-201ENST00000375703 DHX35Q9H5Z1 703 aaKnown RBP15.06■□□□□ 0
MSH5-201ENST00000375703 TXNRD2Q9NNW7 524 aa15.06■□□□□ 0
MSH5-201ENST00000375703 FAM49BQ9NUQ9 324 aa15.06■□□□□ 0
MSH5-201ENST00000375703 MARCOQ9UEW3 520 aaPredicted RBP15.06■□□□□ 0
MSH5-201ENST00000375703 PCDHA11Q9Y5I1 949 aa15.06■□□□□ 0
MSH5-201ENST00000375703 HMX2A2RU54 273 aa15.05■□□□□ 0
MSH5-201ENST00000375703 A6NJR5 290 aa15.05■□□□□ 0
MSH5-201ENST00000375703 PAPSS1O43252 624 aaPredicted RBP15.05■□□□□ 0
MSH5-201ENST00000375703 BPGMP07738 259 aa15.05■□□□□ 0
MSH5-201ENST00000375703 TFE3P19532 575 aaPredicted RBP15.05■□□□□ 0
MSH5-201ENST00000375703 L1CAMP32004 1257 aa15.05■□□□□ 0
MSH5-201ENST00000375703 SERPINB9P50453 376 aa15.05■□□□□ 0
MSH5-201ENST00000375703 PKDCCQ504Y2 493 aa15.05■□□□□ 0
MSH5-201ENST00000375703 ZNF534Q76KX8 674 aa15.05■□□□□ 0
MSH5-201ENST00000375703 SESTD1Q86VW0 696 aa15.05■□□□□ 0
MSH5-201ENST00000375703 MRPL45Q9BRJ2 306 aaKnown RBP15.05■□□□□ 0
MSH5-201ENST00000375703 ARHGEF4Q9NR80 690 aa15.05■□□□□ 0
MSH5-201ENST00000375703 HESX1Q9UBX0 185 aa15.05■□□□□ 0
MSH5-201ENST00000375703 LTBP3Q9NS15 1303 aa15.05■□□□□ 0
MSH5-201ENST00000375703 H3BRJ5 948 aa15.05■□□□□ -0
MSH5-201ENST00000375703 TBX10O75333 385 aa15.05■□□□□ -0
MSH5-201ENST00000375703 TPSB2P20231 275 aa15.05■□□□□ -0
MSH5-201ENST00000375703 GRIA1P42261 906 aa15.05■□□□□ -0
MSH5-201ENST00000375703 SNX16P57768 344 aa15.05■□□□□ -0
MSH5-201ENST00000375703 STX3Q13277 289 aa15.05■□□□□ -0
MSH5-201ENST00000375703 THOC5Q13769 683 aaKnown RBP15.05■□□□□ -0
MSH5-201ENST00000375703 TPSAB1Q15661 275 aa15.05■□□□□ -0
MSH5-201ENST00000375703 TEX44Q53QW1 395 aa15.05■□□□□ -0
MSH5-201ENST00000375703 MDH1BQ5I0G3 518 aa15.05■□□□□ -0
MSH5-201ENST00000375703 KCNT2Q6UVM3 1135 aa15.05■□□□□ -0
MSH5-201ENST00000375703 RFX8Q6ZV50 586 aa15.05■□□□□ -0
MSH5-201ENST00000375703 IFNLR1Q8IU57 520 aaPredicted RBP15.05■□□□□ -0
MSH5-201ENST00000375703 STKLD1Q8NE28 680 aa15.05■□□□□ -0
MSH5-201ENST00000375703 NRG4Q8WWG1 115 aa15.05■□□□□ -0
MSH5-201ENST00000375703 SCG3Q8WXD2 468 aaKnown RBP15.05■□□□□ -0
MSH5-201ENST00000375703 RILPQ96NA2 401 aa15.05■□□□□ -0
MSH5-201ENST00000375703 MAGEB5Q9BZ81 275 aa15.05■□□□□ -0
MSH5-201ENST00000375703 C20orf27Q9GZN8 174 aa15.05■□□□□ -0
MSH5-201ENST00000375703 SNX9Q9Y5X1 595 aa15.05■□□□□ -0
MSH5-201ENST00000375703 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.05■□□□□ -0
MSH5-201ENST00000375703 DNAJC25-GNG10A0A024R161 153 aa15.04■□□□□ -0
MSH5-201ENST00000375703 BIRC5O15392 142 aa15.04■□□□□ -0
MSH5-201ENST00000375703 GABBR2O75899 941 aa15.04■□□□□ -0
MSH5-201ENST00000375703 ZFXP17010 805 aaPredicted RBP15.04■□□□□ -0
MSH5-201ENST00000375703 MRPS35P82673 323 aaKnown RBP15.04■□□□□ -0
MSH5-201ENST00000375703 RAB3IL1Q8TBN0 382 aa15.04■□□□□ -0
MSH5-201ENST00000375703 NLRP7Q8WX94 980 aa15.04■□□□□ -0
MSH5-201ENST00000375703 FAM161BQ96MY7 647 aa15.04■□□□□ -0
MSH5-201ENST00000375703 STX18Q9P2W9 335 aaKnown RBP15.04■□□□□ -0
MSH5-201ENST00000375703 RBPJLQ9UBG7 517 aa15.04■□□□□ -0
MSH5-201ENST00000375703 A8MXQ7 604 aa15.04■□□□□ -0
MSH5-201ENST00000375703 ZNF487B1APH4 448 aa15.04■□□□□ -0
MSH5-201ENST00000375703 MAGEC1O60732 1142 aa15.04■□□□□ -0
MSH5-201ENST00000375703 SETSIPP0DME0 302 aa15.04■□□□□ -0
MSH5-201ENST00000375703 BAG6P46379 1132 aa15.04■□□□□ -0
MSH5-201ENST00000375703 NR2C2P49116 596 aa15.04■□□□□ -0
MSH5-201ENST00000375703 RAP1GDS1P52306 607 aa15.04■□□□□ -0
MSH5-201ENST00000375703 ATXN1P54253 815 aaKnown RBP15.04■□□□□ -0
MSH5-201ENST00000375703 IRX4P78413 519 aa15.04■□□□□ -0
MSH5-201ENST00000375703 KDSRQ06136 332 aa15.04■□□□□ -0
MSH5-201ENST00000375703 KLC1Q07866 573 aa15.04■□□□□ -0
MSH5-201ENST00000375703 RCN2Q14257 317 aa15.04■□□□□ -0
MSH5-201ENST00000375703 LRRC74BQ6ZQY2 392 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms