RNA–Protein interactions for RNA: ENST00000374733.1

ABCA1-201, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-201ENST00000374733 PCDHB6Q9Y5E3 794 aa11.35□□□□□ -0.59
ABCA1-201ENST00000374733 TTC26A0AVF1 554 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 CYB561D2O14569 222 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 XPOTO43592 962 aaKnown RBP11.34□□□□□ -0.59
ABCA1-201ENST00000374733 MED24O75448 989 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 ITGAVP06756 1048 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 TXKP42681 527 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 MATR3P43243 847 aaKnown RBP eCLIP11.34□□□□□ -0.591e-6■■■■□ 21.4
ABCA1-201ENST00000374733 INSM1Q01101 510 aaPredicted RBP11.34□□□□□ -0.59
ABCA1-201ENST00000374733 TSPY1Q01534 308 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 ANO4Q32M45 955 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 FUT11Q495W5 492 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 PRAMEF14Q5SWL7 426 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 GRAMD4Q6IC98 578 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 GALNT17Q6IS24 598 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 CCDC81Q6ZN84 652 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 Q6ZUG5 572 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 CATSPER3Q86XQ3 398 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 SCN4BQ8IWT1 228 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 TSEN2Q8NCE0 465 aaKnown RBP11.34□□□□□ -0.59
ABCA1-201ENST00000374733 KIFAP3Q92845 792 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 LIN37Q96GY3 246 aaPredicted RBP11.34□□□□□ -0.59
ABCA1-201ENST00000374733 MKRN2Q9H000 416 aaKnown RBP11.34□□□□□ -0.59
ABCA1-201ENST00000374733 PLEKHA5Q9HAU0 1116 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 ITM2CQ9NQX7 267 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 STARD13Q9Y3M8 1113 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 POLQO75417 2590 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 CSMD1Q96PZ7 3565 aa11.34□□□□□ -0.59
ABCA1-201ENST00000374733 A0A1B0GTQ1 180 aa11.33□□□□□ -0.6
ABCA1-201ENST00000374733 CLEC18AA5D8T8 446 aa11.33□□□□□ -0.6
ABCA1-201ENST00000374733 LACTBL1A8MY62 500 aa11.33□□□□□ -0.6
ABCA1-201ENST00000374733 HOXC11O43248 304 aaPredicted RBP11.33□□□□□ -0.6
ABCA1-201ENST00000374733 PAPSS1O43252 624 aaPredicted RBP11.33□□□□□ -0.6
ABCA1-201ENST00000374733 WFS1O76024 890 aa11.33□□□□□ -0.6
ABCA1-201ENST00000374733 ABCB4P21439 1286 aa11.33□□□□□ -0.6
ABCA1-201ENST00000374733 OXTRP30559 389 aa11.33□□□□□ -0.6
ABCA1-201ENST00000374733 CTSKP43235 329 aa11.33□□□□□ -0.6
ABCA1-201ENST00000374733 NPTX2P47972 431 aa11.33□□□□□ -0.6
ABCA1-201ENST00000374733 SLC7A9P82251 487 aa11.33□□□□□ -0.6
ABCA1-201ENST00000374733 SSRP1Q08945 709 aaKnown RBP11.33□□□□□ -0.6
ABCA1-201ENST00000374733 STARD3Q14849 445 aa11.33□□□□□ -0.6
ABCA1-201ENST00000374733 NFE2Q16621 373 aaPredicted RBP11.33□□□□□ -0.6
ABCA1-201ENST00000374733 CCDC142Q17RM4 750 aa11.33□□□□□ -0.6
ABCA1-201ENST00000374733 C9orf57Q5W0N0 161 aa11.33□□□□□ -0.6
ABCA1-201ENST00000374733 CLEC18BQ6UXF7 455 aa11.33□□□□□ -0.6
ABCA1-201ENST00000374733 TREML4Q6UXN2 200 aa11.33□□□□□ -0.6
ABCA1-201ENST00000374733 SLC9A9Q8IVB4 645 aa11.33□□□□□ -0.6
ABCA1-201ENST00000374733 CLEC18CQ8NCF0 446 aa11.33□□□□□ -0.6
ABCA1-201ENST00000374733 SCFD1Q8WVM8 642 aa11.33□□□□□ -0.6
ABCA1-201ENST00000374733 RNF38Q9H0F5 515 aa11.33□□□□□ -0.6
ABCA1-201ENST00000374733 C6orf106Q9H6K1 298 aaPredicted RBP11.33□□□□□ -0.6
ABCA1-201ENST00000374733 LRRC4CQ9HCJ2 640 aa11.33□□□□□ -0.6
ABCA1-201ENST00000374733 DNAJC17Q9NVM6 304 aaKnown RBP11.33□□□□□ -0.6
ABCA1-201ENST00000374733 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.33□□□□□ -0.6
ABCA1-201ENST00000374733 MYH11P35749 1972 aa11.32□□□□□ -0.6
ABCA1-201ENST00000374733 ARID1BQ8NFD5 2236 aaPredicted RBP11.32□□□□□ -0.6
ABCA1-201ENST00000374733 PRRT4C9JH25 899 aa11.32□□□□□ -0.6
ABCA1-201ENST00000374733 DEXIO95424 95 aa11.32□□□□□ -0.6
ABCA1-201ENST00000374733 ABL1P00519 1130 aa11.32□□□□□ -0.6
ABCA1-201ENST00000374733 CLTAP09496 248 aa11.32□□□□□ -0.6
ABCA1-201ENST00000374733 PLA2G4AP47712 749 aa11.32□□□□□ -0.6
ABCA1-201ENST00000374733 ERVPABLB-1P60509 514 aa11.32□□□□□ -0.6
ABCA1-201ENST00000374733 ZSCAN23Q3MJ62 389 aa11.32□□□□□ -0.6
ABCA1-201ENST00000374733 LINC00303Q3SY05 128 aa11.32□□□□□ -0.6
ABCA1-201ENST00000374733 EARS2Q5JPH6 523 aaKnown RBP11.32□□□□□ -0.6
ABCA1-201ENST00000374733 SPATA1Q5VX52 437 aa11.32□□□□□ -0.6
ABCA1-201ENST00000374733 LSMEM2Q8N112 164 aa11.32□□□□□ -0.6
ABCA1-201ENST00000374733 FAM26EQ8N5C1 309 aa11.32□□□□□ -0.6
ABCA1-201ENST00000374733 NANOS1Q8WY41 292 aaKnown RBP11.32□□□□□ -0.6
ABCA1-201ENST00000374733 RFFLQ8WZ73 363 aa11.32□□□□□ -0.6
ABCA1-201ENST00000374733 NUP58Q9BVL2 599 aa11.32□□□□□ -0.6
ABCA1-201ENST00000374733 TUFT1Q9NNX1 390 aa11.32□□□□□ -0.6
ABCA1-201ENST00000374733 KMT5AQ9NQR1 393 aa11.32□□□□□ -0.6
ABCA1-201ENST00000374733 TRPM5Q9NZQ8 1165 aa11.32□□□□□ -0.6
ABCA1-201ENST00000374733 TBC1D14Q9P2M4 693 aa11.32□□□□□ -0.6
ABCA1-201ENST00000374733 ARHGAP28Q9P2N2 729 aa11.32□□□□□ -0.6
ABCA1-201ENST00000374733 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.32□□□□□ -0.6
ABCA1-201ENST00000374733 CKAP5Q14008 2032 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 CLDN3O15551 220 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 TOM1L1O75674 476 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 MT-CO3P00414 261 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 FAM87AP0C7U9 286 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 MBL2P11226 248 aaPredicted RBP11.31□□□□□ -0.6
ABCA1-201ENST00000374733 ACADMP11310 421 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 PFKLP17858 780 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 ITGB6P18564 788 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 POU3F2P20265 443 aaPredicted RBP11.31□□□□□ -0.6
ABCA1-201ENST00000374733 ACAT1P24752 427 aaKnown RBP11.31□□□□□ -0.6
ABCA1-201ENST00000374733 C21orf59P57076 290 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 ORC1Q13415 861 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 ILKQ13418 452 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 JADE1Q6IE81 842 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 TMEM25Q86YD3 366 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 CACTIN-AS1Q8N1I8 211 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 KIAA1958Q8N8K9 716 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 LEO1Q8WVC0 666 aaPredicted RBP11.31□□□□□ -0.6
ABCA1-201ENST00000374733 PRCCQ92733 491 aaPredicted RBP11.31□□□□□ -0.6
ABCA1-201ENST00000374733 EXTL1Q92935 676 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 SIPA1Q96FS4 1042 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 ELF4Q99607 663 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms