RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 VWA8A3KMH1 1905 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 SYNJ2BP-COX16A0A087WUM0 186 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 OR6C75A6NL08 312 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 NDC80O14777 642 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 RIPK2O43353 540 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 F9P00740 461 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 GOT1P17174 413 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 RPL22P35268 128 aaKnown RBP16.3■□□□□ 0.2
HDAC8-209ENST00000373589 ADRA1BP35368 520 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 MORF4L2Q15014 288 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 CTXN3Q4LDR2 81 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 UBAP2Q5T6F2 1119 aaKnown RBP16.3■□□□□ 0.2
HDAC8-209ENST00000373589 FUT10Q6P4F1 479 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 DARS2Q6PI48 645 aaKnown RBP16.3■□□□□ 0.2
HDAC8-209ENST00000373589 FBXO46Q6PJ61 603 aaPredicted RBP16.3■□□□□ 0.2
HDAC8-209ENST00000373589 VSTM1Q6UX27 236 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.3■□□□□ 0.2
HDAC8-209ENST00000373589 ZC3H18Q86VM9 953 aaKnown RBP16.3■□□□□ 0.2
HDAC8-209ENST00000373589 CCDC25Q86WR0 208 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 ADAM32Q8TC27 787 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 EDEM1Q92611 657 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 ARMC5Q96C12 935 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 RTP4Q96DX8 246 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 TRIM62Q9BVG3 475 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 FAM204AQ9H8W3 233 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 USP29Q9HBJ7 922 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 TMBIM4Q9HC24 238 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 TMPRSS4Q9NRS4 437 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 COX16Q9P0S2 106 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 FBXW11Q9UKB1 542 aa16.3■□□□□ 0.2
HDAC8-209ENST00000373589 FARP1Q9Y4F1 1045 aaPredicted RBP16.3■□□□□ 0.2
HDAC8-209ENST00000373589 BCLAF3A2AJT9 711 aaKnown RBP16.29■□□□□ 0.2
HDAC8-209ENST00000373589 GOLGA6CA6NDK9 693 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 I6L893 689 aaPredicted RBP16.29■□□□□ 0.2
HDAC8-209ENST00000373589 TBC1D4O60343 1298 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 GOLGA6DP0CG33 693 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 ARL4AP40617 200 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 MAGEA11P43364 429 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 NR2C2P49116 596 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 ELAVL2Q12926 359 aaKnown RBP16.29■□□□□ 0.2
HDAC8-209ENST00000373589 SLC29A2Q14542 456 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 TERF2Q15554 542 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 DENND2CQ68D51 928 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 ZNF280DQ6N043 979 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 CNKSR3Q6P9H4 555 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 CEP57Q86XR8 500 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 LRRC43Q8N309 656 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 RNF139Q8WU17 664 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 PKNOX2Q96KN3 472 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 C8orf48Q96LL4 319 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 PWWP2AQ96N64 755 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 CDC42EP4Q9H3Q1 356 aaKnown RBP16.29■□□□□ 0.2
HDAC8-209ENST00000373589 ANLNQ9NQW6 1124 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 DDIT4Q9NX09 232 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 GOLGA6AQ9NYA3 693 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 ABI2Q9NYB9 513 aaPredicted RBP16.29■□□□□ 0.2
HDAC8-209ENST00000373589 SHOC2Q9UQ13 582 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 ATP11BQ9Y2G3 1177 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 HEY1Q9Y5J3 304 aa16.29■□□□□ 0.2
HDAC8-209ENST00000373589 CFAP69A5D8W1 941 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 H7C0C1 242 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 IGLV3-25P01717 112 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 SHBGP04278 402 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 AMPD1P23109 780 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 ATP5OP48047 213 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 GJA8P48165 433 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 CXCR3P49682 368 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 GBE1Q04446 702 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 SLC10A2Q12908 348 aaPredicted RBP16.28■□□□□ 0.2
HDAC8-209ENST00000373589 SEMA3BQ13214 749 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 XRCC4Q13426 336 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 EIF4EBP2Q13542 120 aaPredicted RBP16.28■□□□□ 0.2
HDAC8-209ENST00000373589 IKBKEQ14164 716 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 EFHC2Q5JST6 749 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 NCBP2-AS2Q69YL0 99 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 PCGF5Q86SE9 256 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 TMEM173Q86WV6 379 aaPredicted RBP16.28■□□□□ 0.2
HDAC8-209ENST00000373589 ANKLE1Q8NAG6 615 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 BCL7CQ8WUZ0 217 aaPredicted RBP16.28■□□□□ 0.2
HDAC8-209ENST00000373589 B3GALT6Q96L58 329 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 ARHGEF4Q9NR80 690 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 TMEM39AQ9NV64 488 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 PCDHB5Q9Y5E4 795 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 FNDC1Q4ZHG4 1894 aaPredicted RBP16.28■□□□□ 0.2
HDAC8-209ENST00000373589 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.28■□□□□ 0.2
HDAC8-209ENST00000373589 NT5C1B-RDH14C9J2C7 533 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 H3BRJ5 948 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 EFEMP2O95967 443 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 MYZAPP0CAP1 466 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 RFC2P35250 354 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 PBX3P40426 434 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 CTCFP49711 727 aaPredicted RBP16.28■□□□□ 0.2
HDAC8-209ENST00000373589 YWHAGP61981 247 aaKnown RBP eCLIP16.28■□□□□ 0.2
HDAC8-209ENST00000373589 B4GALNT4Q76KP1 1039 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 TAC4Q86UU9 113 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 SCN4BQ8IWT1 228 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 DQX1Q8TE96 717 aaKnown RBP16.28■□□□□ 0.2
HDAC8-209ENST00000373589 CPT1BQ92523 772 aa16.28■□□□□ 0.2
HDAC8-209ENST00000373589 PRCCQ92733 491 aaPredicted RBP16.28■□□□□ 0.2
HDAC8-209ENST00000373589 TMEM109Q9BVC6 243 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms