RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 RELL1Q8IUW5 271 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 MORC4Q8TE76 937 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 NCSTNQ92542 709 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 PPP2R3CQ969Q6 453 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 TMEM143Q96AN5 459 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 RBM17Q96I25 401 aaKnown RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 PIWIL1Q96J94 861 aaKnown RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 NAP1L4Q99733 375 aaKnown RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 DCUN1D5Q9BTE7 237 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 YIPF2Q9BWQ6 316 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 ARMC7Q9H6L4 198 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 COPS7BQ9H9Q2 264 aaPredicted RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 ANLNQ9NQW6 1124 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 TMOD2Q9NZR1 351 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 GMPR2Q9P2T1 348 aaKnown RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 BLOC1S6Q9UL45 172 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 POMPQ9Y244 141 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 HBS1LQ9Y450 684 aaKnown RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 HEY1Q9Y5J3 304 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 SNCAIPQ9Y6H5 919 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 IKBKGQ9Y6K9 419 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 PLIN4Q96Q06 1357 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 TMEM191CA6NGB0 347 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 AIM2O14862 343 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 TPD52L2O43399 206 aaKnown RBP5.61□□□□□ -1.51
ATG4A-204ENST00000372246 PEX10O60683 326 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 RPS6KA4O75676 772 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 RFPL1O75677 317 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 STAMBPO95630 424 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 APRTP07741 180 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 PDGFRBP09619 1106 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 TMEM191BP0C7N4 346 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 PTPN1P18031 435 aaKnown RBP5.61□□□□□ -1.51
ATG4A-204ENST00000372246 PHKA2P46019 1235 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 NCKAP1LP55160 1127 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 CDH8P55286 799 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 GTF2BQ00403 316 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 TUBB3Q13509 450 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 TEX44Q53QW1 395 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 TFDP3Q5H9I0 405 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 RC3H1Q5TC82 1133 aaKnown RBP5.61□□□□□ -1.51
ATG4A-204ENST00000372246 PLEKHA7Q6IQ23 1121 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 LRRC8BQ6P9F7 803 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 TRAF7Q6Q0C0 670 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 ACAD11Q709F0 780 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 UTS2BQ765I0 119 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 NET1Q7Z628 596 aaPredicted RBP5.61□□□□□ -1.51
ATG4A-204ENST00000372246 ZBTB33Q86T24 672 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 PPIL6Q8IXY8 311 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 ADGRF2Q8IZF7 708 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 ABRAQ8N0Z2 381 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 LILRA2Q8N149 483 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 MAPK15Q8TD08 544 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 ZNF606Q8WXB4 792 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 NR1H4Q96RI1 486 aaPredicted RBP5.61□□□□□ -1.51
ATG4A-204ENST00000372246 IWS1Q96ST2 819 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 DHRS4Q9BTZ2 278 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 MRPL1Q9BYD6 325 aaKnown RBP5.61□□□□□ -1.51
ATG4A-204ENST00000372246 VCX3BQ9H321 246 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 WDR55Q9H6Y2 383 aaPredicted RBP5.61□□□□□ -1.51
ATG4A-204ENST00000372246 IFT122Q9HBG6 1241 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 VCX3AQ9NNX9 186 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 RAB6BQ9NRW1 208 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 TBC1D22BQ9NU19 505 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 SEL1LQ9UBV2 794 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 SLC24A2Q9UI40 661 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 CDH22Q9UJ99 828 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 ZNF510Q9Y2H8 683 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 TBC1D30Q9Y2I9 924 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 PCDHB2Q9Y5E7 798 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 PSAT1Q9Y617 370 aa5.61□□□□□ -1.51
ATG4A-204ENST00000372246 MRPL42Q9Y6G3 142 aaKnown RBP5.61□□□□□ -1.51
ATG4A-204ENST00000372246 PLOD2O00469 737 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 PSTPIP1O43586 416 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 MAGEC1O60732 1142 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 SIN3BO75182 1162 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 ZBTB7AO95365 584 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 CRTAMO95727 393 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 CLPTM1O96005 669 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 PABPC4LP0CB38 370 aaKnown RBP5.6□□□□□ -1.51
ATG4A-204ENST00000372246 RBP3P10745 1247 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 COL6A2P12110 1019 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 P4HA1P13674 534 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 MAN1A1P33908 653 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 STAT2P52630 851 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 CHN2P52757 468 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 EIF3EP60228 445 aaKnown RBP5.6□□□□□ -1.51
ATG4A-204ENST00000372246 MS4A2Q01362 244 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 DPYSL3Q14195 570 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 KRT72Q14CN4 511 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 NFIL3Q16649 462 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 C15orf59Q2T9L4 293 aaPredicted RBP5.6□□□□□ -1.51
ATG4A-204ENST00000372246 ACBD5Q5T8D3 534 aaPredicted RBP5.6□□□□□ -1.51
ATG4A-204ENST00000372246 TMEM198Q66K66 360 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 GPAT2Q6NUI2 795 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 DENND1BQ6P3S1 775 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 DNAJC24Q6P3W2 148 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 KLHL35Q6PF15 583 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 MOXD1Q6UVY6 613 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms