RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 NCKAP1LP55160 1127 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 NAB1Q13506 487 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 BMPR2Q13873 1038 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 DUPD1Q68J44 220 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 RRM2BQ7LG56 351 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 TNIP2Q8NFZ5 429 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 TUBGCP3Q96CW5 907 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 SIKE1Q9BRV8 207 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 CD248Q9HCU0 757 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 RBM22Q9NW64 420 aaKnown RBP eCLIP12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 VAV3Q9UKW4 847 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 EVPLLA8MZ36 301 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 MPOP05164 745 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 ADIGQ0VDE8 80 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 FOXD4Q12950 439 aaPredicted RBP12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 IQSEC1Q6DN90 963 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 TMPRSS6Q8IU80 811 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 LZICQ8WZA0 190 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 THAP11Q96EK4 314 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 THAP1Q9NVV9 213 aa12.2□□□□□ -0.46
DEPDC1-201ENST00000370966 KANSL1LA0AUZ9 987 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 FSCN2O14926 492 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 MAFO75444 373 aaPredicted RBP12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 CDH18Q13634 790 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 DPYSL3Q14195 570 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 PKN2Q16513 984 aaKnown RBP12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 CCDC153Q494R4 210 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 WLSQ5T9L3 541 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 ZNF280DQ6N043 979 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 SLC30A9Q6PML9 568 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 KCNT2Q6UVM3 1135 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 YTHDF3Q7Z739 585 aaKnown RBP12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 SCUBE3Q8IX30 993 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 SHCBP1LQ9BZQ2 653 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 DLGAP2Q9P1A6 1054 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 NFAT5O94916 1531 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 HEATR9A2RTY3 570 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 MAGEA13PA6NCF6 341 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 E5RJQ4 531 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 E7ENQ6 273 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 RNF225M0QZC1 329 aaPredicted RBP12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 OPLAHO14841 1288 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 SKAP2O75563 359 aaPredicted RBP12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 DDNO94850 711 aaPredicted RBP12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 CRTAMO95727 393 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 TSHRP16473 764 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 RENBPP51606 427 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 KRT72Q14CN4 511 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 TTMPQ5BVD1 217 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 GRTP1Q5TC63 336 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 OVOS1Q6IE37 1185 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 LRRC8BQ6P9F7 803 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 LAYNQ6UX15 382 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 BNC2Q6ZN30 1099 aaPredicted RBP12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 POLNQ7Z5Q5 900 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 CCDC33Q8N5R6 958 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 SRPK1Q96SB4 655 aaKnown RBP12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 NDUFA13Q9P0J0 144 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 FAM32AQ9Y421 112 aaKnown RBP12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 DTNAQ9Y4J8 743 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 H0Y626 953 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 PDHXO00330 501 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 TRIM13O60858 407 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 SEC24DO94855 1032 aaPredicted RBP12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 TRIM16O95361 564 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 ABHD2P08910 425 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 PGAM1P18669 254 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 ADORA2AP29274 412 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 PRKAA1Q13131 559 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 ECM1Q16610 540 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 CTXN3Q4LDR2 81 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 WASHC2DQ5SRD0 308 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 FAM9CQ8IZT9 166 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 TAGAPQ8N103 731 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 DEFB106AQ8N104 65 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 GALNT4Q8N4A0 578 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 TBC1D19Q8N5T2 526 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 DNAJB3Q8WWF6 145 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 OTUB1Q96FW1 271 aaPredicted RBP12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 UBXN6Q9BZV1 441 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 FBXO44Q9H4M3 255 aa12.19□□□□□ -0.46
DEPDC1-201ENST00000370966 ERI2A8K979 691 aaKnown RBP12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 LGALS2P05162 132 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 ALADP13716 330 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 AMPD1P23109 780 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 CDK7P50613 346 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 DSG1Q02413 1049 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 CYLC2Q14093 348 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 SPANXN3Q5MJ09 141 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 CELF3Q5SZQ8 465 aaKnown RBP12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 MARC1Q5VT66 337 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 ELMO3Q96BJ8 720 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 SMARCD1Q96GM5 515 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 ZNF333Q96JL9 665 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 CNDP1Q96KN2 507 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 HSFY1Q96LI6 401 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 PRPF18Q99633 342 aaKnown RBP12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 FICDQ9BVA6 458 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 GPAMQ9HCL2 828 aa12.18□□□□□ -0.46
DEPDC1-201ENST00000370966 ACP6Q9NPH0 428 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms