RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 PTPRJQ12913 1337 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 K7ESF4 209 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 KIAA0391O15091 583 aaKnown RBP3.81□□□□□ -1.8
MCF2-202ENST00000370573 PCDHGA12O60330 932 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 MGEA5O60502 916 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 EFCAB14O75071 495 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 ERLIN2O94905 339 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 KCNH1O95259 989 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 FKBP9O95302 570 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 ASGR2P07307 311 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 STAG3L1P0CL83 205 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 GHRP10912 638 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 SRFP11831 508 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 ACTN1P12814 892 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 KRT13P13646 458 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 CD53P19397 219 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 SLC9A1P19634 815 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 LPOP22079 712 aaPredicted RBP3.81□□□□□ -1.8
MCF2-202ENST00000370573 PON1P27169 355 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 CD52P31358 61 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 HTR3AP46098 478 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 GCLMP48507 274 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 FMO5P49326 533 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 FXR1P51114 621 aaKnown RBP eCLIP3.81□□□□□ -1.8
MCF2-202ENST00000370573 ADKP55263 362 aaKnown RBP3.81□□□□□ -1.8
MCF2-202ENST00000370573 TLE2Q04725 743 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 RAPGEF1Q13905 1077 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 GAB4Q2WGN9 574 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 ZNF568Q3ZCX4 644 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 TCERG1LQ5VWI1 586 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 LMBRD2Q68DH5 695 aaPredicted RBP3.81□□□□□ -1.8
MCF2-202ENST00000370573 C15orf39Q6ZRI6 1047 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 FKBP9P1Q75LS8 142 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 TMPRSS7Q7RTY8 843 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 RTN4RL1Q86UN2 441 aaPredicted RBP3.81□□□□□ -1.8
MCF2-202ENST00000370573 BRSK2Q8IWQ3 736 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 OR5B17Q8NGF7 314 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 LMO3Q8TAP4 145 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 CACTINQ8WUQ7 758 aaKnown RBP3.81□□□□□ -1.8
MCF2-202ENST00000370573 SEMA4DQ92854 862 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 PAWRQ96IZ0 340 aaKnown RBP3.81□□□□□ -1.8
MCF2-202ENST00000370573 DIRC2Q96SL1 478 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 SEZ6LQ9BYH1 1024 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 GPR62Q9BZJ7 368 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 TMEM117Q9H0C3 514 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 MMRN2Q9H8L6 949 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 KIAA1586Q9HCI6 787 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 ERVK-5Q9HDB9 667 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 EMC7Q9NPA0 242 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 SIX2Q9NPC8 291 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 AGPAT5Q9NUQ2 364 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 RBAKQ9NYW8 714 aaPredicted RBP3.81□□□□□ -1.8
MCF2-202ENST00000370573 FNIP2Q9P278 1114 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 TMEM59LQ9UK28 342 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 PADI3Q9ULW8 664 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 APOBEC2Q9Y235 224 aaKnown RBP3.81□□□□□ -1.8
MCF2-202ENST00000370573 PCDHGA9Q9Y5G4 932 aaKnown RBP3.81□□□□□ -1.8
MCF2-202ENST00000370573 PCDHGA8Q9Y5G5 932 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 PCDHGA7Q9Y5G6 932 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 PCDHGA6Q9Y5G7 932 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 PCDHGA3Q9Y5H0 932 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 PCDHGA2Q9Y5H1 932 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 UMODL1Q5DID0 1318 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 ITIH6Q6UXX5 1313 aa3.81□□□□□ -1.8
MCF2-202ENST00000370573 TTC26A0AVF1 554 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 LACTBL1A8MY62 500 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 M0QZ92 97 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 PQBP1O60828 265 aaKnown RBP3.8□□□□□ -1.8
MCF2-202ENST00000370573 RPS6KA5O75582 802 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 CLEC3AO75596 197 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 VNN1O95497 513 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 C4BPAP04003 597 aaKnown RBP3.8□□□□□ -1.8
MCF2-202ENST00000370573 SOD2P04179 222 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 GYPCP04921 128 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 TPM3P06753 285 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 TPM2P07951 284 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 CLTAP09496 248 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 CXCL8P10145 99 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 DLATP10515 647 aaKnown RBP3.8□□□□□ -1.8
MCF2-202ENST00000370573 SFPQP23246 707 aaKnown RBP eCLIP3.8□□□□□ -1.8
MCF2-202ENST00000370573 AXLP30530 894 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 CASP14P31944 242 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 GALK1P51570 392 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 ENPEPQ07075 957 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 LRMPQ12912 555 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 GBX1Q14549 363 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 LRRC26Q2I0M4 334 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 TCTN1Q2MV58 587 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 TRIM60Q495X7 471 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 MINDY4Q4G0A6 757 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 EPC2Q52LR7 807 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 FKBP15Q5T1M5 1219 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 SLC35F1Q5T1Q4 408 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 GTF2IRD2BQ6EKJ0 949 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 NOTUMQ6P988 496 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 SLC27A1Q6PCB7 646 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 GJB7Q6PEY0 223 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 PRR23BQ6ZRT6 265 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 ANKRD33Q7Z3H0 272 aa3.8□□□□□ -1.8
MCF2-202ENST00000370573 TMC3Q7Z5M5 1100 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms