RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 RING1Q06587 406 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 MAMLD1Q13495 774 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 TDGQ13569 410 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 SPA17Q15506 151 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 SLC25A52Q3SY17 297 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 CC2D1AQ6P1N0 951 aaPredicted RBP16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 DCUN1D2Q6PH85 259 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 H2AFVQ71UI9 128 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 YAF2Q8IY57 180 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 SLC44A3Q8N4M1 653 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 CTNNBL1Q8WYA6 563 aaPredicted RBP16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 NT5C3BQ969T7 300 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 RSPRY1Q96DX4 576 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 EIF3CQ99613 913 aaKnown RBP16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 TRMT61BQ9BVS5 477 aaKnown RBP16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 COL25A1Q9BXS0 654 aaPredicted RBP16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 DCLK3Q9C098 648 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 THAP2Q9H0W7 228 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 LSM7Q9UK45 103 aaKnown RBP16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 INTUQ9ULD6 942 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 TLR6Q9Y2C9 796 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 SH3BP1Q9Y3L3 701 aa16.21■□□□□ 0.18
PRPF38B-202ENST00000370022 SOWAHDA6NJG2 315 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 C2CD4BA6NLJ0 364 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 SLC9A3R1O14745 358 aaPredicted RBP16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 NRDCO43847 1150 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 NDUFA10O95299 355 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 TRUB2O95900 331 aaKnown RBP16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 F9P00740 461 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 TMEM253P0C7T8 217 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 DESP17661 470 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 SDC4P31431 198 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 FLT3P36888 993 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 GALCP54803 685 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 MTA1Q13330 715 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 MTF1Q14872 753 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 TRIP4Q15650 581 aaPredicted RBP16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 ARHGAP29Q52LW3 1261 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 HTR3DQ70Z44 454 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 PHLDB2Q86SQ0 1253 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 TAC4Q86UU9 113 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 RNF135Q8IUD6 432 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 TMEM139Q8IV31 216 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 RSAD2Q8WXG1 361 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 PGAP3Q96FM1 320 aaPredicted RBP16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 MCEEQ96PE7 176 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 UHRF1Q96T88 793 aaPredicted RBP16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 NPY6RQ99463 290 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 RPP25Q9BUL9 199 aaKnown RBP16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 FAM204AQ9H8W3 233 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 GKN1Q9NS71 199 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 CFAP97Q9P2B7 532 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 TBC1D14Q9P2M4 693 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 ZNF510Q9Y2H8 683 aa16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 EPN1Q9Y6I3 576 aaPredicted RBP16.2■□□□□ 0.18
PRPF38B-202ENST00000370022 CHADO15335 359 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 IRAK2O43187 625 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 STC2O76061 302 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 IGLV3-27P01718 113 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 ASGR2P07307 311 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 PDGFRAP16234 1089 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 GPD1P21695 349 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 RFC1P35251 1148 aaPredicted RBP16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 PTPN9P43378 593 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 HARS2P49590 506 aaKnown RBP16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 TBX4P57082 545 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 EIF4EBP2Q13542 120 aaPredicted RBP16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 NUGGCQ68CJ6 796 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 DNAAF5Q86Y56 855 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 LRRC8AQ8IWT6 810 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 UNC45BQ8IWX7 931 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 RXFP2Q8WXD0 754 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 OTUB2Q96DC9 234 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 PDLIM2Q96JY6 352 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 LRRC3BQ96PB8 259 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 PLA2G2FQ9BZM2 168 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 SORCS3Q9UPU3 1222 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 PAXBP1Q9Y5B6 917 aa16.19■□□□□ 0.18
PRPF38B-202ENST00000370022 M0QYT0 321 aa16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 ZNF263O14978 683 aa16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 ATMINO43313 823 aaPredicted RBP16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 MSI1O43347 362 aaKnown RBP16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 LATS1O95835 1130 aa16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 CYP1A2P05177 515 aa16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 SLC2A3P11169 496 aa16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 SULT1E1P49888 294 aa16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 ZNF143P52747 638 aaPredicted RBP16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 PDGFRLQ15198 375 aa16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 SND1Q7KZF4 910 aaKnown RBP eCLIP16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 EMC1Q8N766 993 aa16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 ST13P5Q8NFI4 369 aaPredicted RBP16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 JOSD2Q8TAC2 188 aa16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 RIN3Q8TB24 985 aa16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 ADAM32Q8TC27 787 aa16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 FNIP1Q8TF40 1166 aa16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 OSCP1Q8WVF1 389 aa16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 IRF7Q92985 503 aa16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 CFAP57Q96MR6 1250 aa16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 DDIT4Q9NX09 232 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms