RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 EBF1Q9UH73 591 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 GIT1Q9Y2X7 761 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 CNOT3O75175 753 aaKnown RBP18.51■□□□□ 0.55
CHTOP-201ENST00000368686 STAMBPO95630 424 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 NCF2P19878 526 aaPredicted RBP18.51■□□□□ 0.55
CHTOP-201ENST00000368686 NFKBIAP25963 317 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 SLC1A6P48664 564 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 PRELPP51888 382 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 OTUD4Q01804 1114 aaKnown RBP18.51■□□□□ 0.55
CHTOP-201ENST00000368686 GABPAQ06546 454 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 C1QBPQ07021 282 aaKnown RBP18.51■□□□□ 0.55
CHTOP-201ENST00000368686 PEX6Q13608 980 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 DPYSQ14117 519 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 ZBED5Q49AG3 693 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 FASTKD1Q53R41 847 aaKnown RBP18.51■□□□□ 0.55
CHTOP-201ENST00000368686 DCAF6Q58WW2 860 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 NEPROQ6NW34 567 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 C16orf87Q6PH81 154 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 C16orf89Q6UX73 402 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 CARM1Q86X55 608 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 NDUFAF2Q8N183 169 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 ACTL9Q8TC94 416 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 CCDC127Q96BQ5 260 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 XPNPEP1Q9NQW7 623 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 VPS28Q9UK41 221 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 TTLL3Q9Y4R7 772 aa18.51■□□□□ 0.55
CHTOP-201ENST00000368686 ZNF335Q9H4Z2 1342 aaPredicted RBP18.5■□□□□ 0.55
CHTOP-201ENST00000368686 GOLGA8IPA6NC78 632 aa18.5■□□□□ 0.55
CHTOP-201ENST00000368686 GOLGA8JA6NMD2 632 aa18.5■□□□□ 0.55
CHTOP-201ENST00000368686 PSMD12O00232 456 aaPredicted RBP18.5■□□□□ 0.55
CHTOP-201ENST00000368686 ZC3H11AO75152 810 aaKnown RBP eCLIP18.5■□□□□ 0.55
CHTOP-201ENST00000368686 PSMD10O75832 226 aa18.5■□□□□ 0.55
CHTOP-201ENST00000368686 C1QAP02745 245 aa18.5■□□□□ 0.55
CHTOP-201ENST00000368686 SERPINB2P05120 415 aa18.5■□□□□ 0.55
CHTOP-201ENST00000368686 RPS3AP61247 264 aaKnown RBP18.5■□□□□ 0.55
CHTOP-201ENST00000368686 NOMO3P69849 1222 aa18.5■□□□□ 0.55
CHTOP-201ENST00000368686 MBLAC2Q68D91 279 aa18.5■□□□□ 0.55
CHTOP-201ENST00000368686 KRT80Q6KB66 452 aa18.5■□□□□ 0.55
CHTOP-201ENST00000368686 STARD8Q92502 1023 aa18.5■□□□□ 0.55
CHTOP-201ENST00000368686 DCUN1D5Q9BTE7 237 aa18.5■□□□□ 0.55
CHTOP-201ENST00000368686 HOMER2Q9NSB8 354 aa18.5■□□□□ 0.55
CHTOP-201ENST00000368686 GIN1Q9NXP7 522 aa18.5■□□□□ 0.55
CHTOP-201ENST00000368686 LYPLA1O75608 230 aaPredicted RBP18.49■□□□□ 0.55
CHTOP-201ENST00000368686 RHBDL3P58872 404 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 SNRNP48Q6IEG0 339 aaKnown RBP18.49■□□□□ 0.55
CHTOP-201ENST00000368686 MAVSQ7Z434 540 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 RSPH3Q86UC2 560 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 CBWD2Q8IUF1 395 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 TAB3Q8N5C8 712 aaPredicted RBP18.49■□□□□ 0.55
CHTOP-201ENST00000368686 ZNF597Q96LX8 424 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 WRNIP1Q96S55 665 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 C1orf112Q9NSG2 853 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 SLC8A2Q9UPR5 921 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 IGLV3-22A0A075B6J6 115 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 TRDMT1O14717 391 aaKnown RBP18.49■□□□□ 0.55
CHTOP-201ENST00000368686 SPTLC1O15269 473 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 ZMPSTE24O75844 475 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 INHBBP09529 407 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 ZNF26P17031 533 aaPredicted RBP18.49■□□□□ 0.55
CHTOP-201ENST00000368686 AOC3Q16853 763 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 STXBP5Q5T5C0 1151 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 NANOGP8Q6NSW7 305 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 PHTF2Q8N3S3 785 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 UBR7Q8N806 425 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 TMEM102Q8N9M5 508 aaPredicted RBP18.49■□□□□ 0.55
CHTOP-201ENST00000368686 DHRS1Q96LJ7 313 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 AMNQ9BXJ7 453 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 ARMC7Q9H6L4 198 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 CLK4Q9HAZ1 481 aaKnown RBP18.49■□□□□ 0.55
CHTOP-201ENST00000368686 GID8Q9NWU2 228 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 SBF2Q86WG5 1849 aa18.49■□□□□ 0.55
CHTOP-201ENST00000368686 ATP1A4Q13733 1029 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 WDR78Q5VTH9 848 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 BNC2Q6ZN30 1099 aaPredicted RBP18.48■□□□□ 0.55
CHTOP-201ENST00000368686 USP37Q86T82 979 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 TBC1D15Q8TC07 691 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 TMC2Q8TDI7 906 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 CFAP36Q96G28 342 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 OLAHQ9NV23 265 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 WRAP73Q9P2S5 460 aaPredicted RBP18.48■□□□□ 0.55
CHTOP-201ENST00000368686 TMEM191CA6NGB0 347 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 DCXO43602 365 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 SULT1C4O75897 302 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 TMEM191BP0C7N4 346 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 PRKCHP24723 683 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 GABRB2P47870 512 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 KLF10Q13118 480 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 CBLBQ13191 982 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 BMPR2Q13873 1038 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 SLC10A5Q5PT55 438 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 C16orf46Q6P387 395 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 MIER3Q7Z3K6 550 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 ZNF420Q8TAQ5 688 aaPredicted RBP18.48■□□□□ 0.55
CHTOP-201ENST00000368686 MMP19Q99542 508 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 C10orf88Q9H8K7 445 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 UTP6Q9NYH9 597 aaKnown RBP18.48■□□□□ 0.55
CHTOP-201ENST00000368686 AGTPBP1Q9UPW5 1226 aa18.48■□□□□ 0.55
CHTOP-201ENST00000368686 MCF2LO15068 1137 aa18.47■□□□□ 0.55
CHTOP-201ENST00000368686 EIF2S1P05198 315 aaKnown RBP18.47■□□□□ 0.55
CHTOP-201ENST00000368686 FGF3P11487 239 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms